Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq1464 123 3e-23 >seq1464 Length=25142 Score = 123 bits (136), Expect = 3e-23 Identities = 261/386 (68%), Gaps = 14/386 (4%) Strand=Plus/Minus Query 136336 CTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGCGGCAG 136395 ||||| ||||||||||||||||||||||| ||| ||| || |||| |||| | Sbjct 17280 CTTCTCCACGTAGTTGTGGTGGCAGTTCACAGCTGTTTTGGTGGTGGTGAAGGGCGCCGC 17221 Query 136396 GCCCGACGCTCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATCCGCGC 136455 || | ||||| | ||||| ||| ||| ||||| || ||||| || || Sbjct 17220 AATGTACTCCCGCATCGTCTCCACCACCGCATCCAGCATCACCTGCCGGTTCCACCAGGC 17161 Query 136456 GAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCTTCGCA 136515 || ||| |||| | ||||| | |||||||| ||||| | || |||| Sbjct 17160 AAACCGCTGCGCCCACTCCACGGCGAAGATGTAGTCGTTGAACTGTGCTGTACCCTCGCG 17101 Query 136516 GAGCCAAGCAAGGTCCTTGTCCAGCGGCTTACGCCCGTCACGGCGCAGCATCATCTC-CT 136574 || | || || |||| |||| || | || | | |||| | | ||| || Sbjct 17100 CAGATACGCCAGATCCTCGTCCGGCAGGCGACTCAGTTGT--GCGCCGA--CGTCTTTCT 17045 Query 136575 TGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGA 136634 ||||| ||||||||||||| ||| || |||||| || ||||||||||| || |||| Sbjct 17044 TGGCCAGCTCGATGAAGATGGTGCCAATACGGTTGCCCACCCCGCGCGAGCCGGAATGGA 16985 Query 136635 GCATCACCCAGAC--GC-------GCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGT 136685 |||||||||| || || | || | || || || |||| |||||||||||||| Sbjct 16984 GCATCACCCACACATGCGGCACCGGTTGTTGATCATCCAGACAGATCTCGATGAAGTGGT 16925 Query 136686 TGCCGCCGCCCAGGGTGCCCAGTTGG 136711 |||| |||||||||||| || ||| Sbjct 16924 TGCCAGTGCCCAGGGTGCCGAGGTGG 16899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701310106805760