Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq4147 221 2e-52 seq5764 199 7e-46 seq2242 199 7e-46 seq1335 199 7e-46 seq1327 199 7e-46 >seq4147 Length=10003 Score = 221 bits (244), Expect = 2e-52 Identities = 860/1324 (65%), Gaps = 71/1324 (5%) Strand=Plus/Minus Query 212948 GTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCT 213007 ||| | ||| || ||| ||||||||| || ||| ||||| || |||||||| | ||| Sbjct 7042 GTAGATGTTCGAGGTGAAGGGCTCGAAGCACTCATTGTTGCCAAGAATCTGCGAGGTGGA 6983 Query 213008 GGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCCG---TGCTCGCCGATGAG 213064 || |||||||| || || ||||| || ||||| || ||| ||| | | | Sbjct 6982 CGCAGTGGGCATCGGCGCAACCAGCAGCGAGTTCCGCATACCGACCTGCACCACCTT--- 6926 Query 213065 GCGCC--GAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTCC-----TTCACGT 213117 | || || ||| | |||||||||| | ||| | | ||| | ||| | Sbjct 6925 -CTCCTTGAGGCTGT-CCCAGTCCCAGCGGCC-----GCTGTTCGGGCGGGGGTTC---T 6876 Query 213118 TCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGG 213177 |||||||||| || || | ||||| | |||| ||||||| |||| | | | ||||| Sbjct 6875 TCCACATGTCGAATTGTAGAATGCCCTGGCTCGCGGGGCTACCCTTGAAGGTTTCGTAGG 6816 Query 213178 GGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAA 213237 |||| | |||||| |||| ||| ||||||| || || || |||||||||| || | Sbjct 6815 GGCCCTCCTCCTTTGCCATCTCCATCGACGCCTCCACAGCGGCAAAGTAGATGGTCTCGA 6756 Query 213238 ATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCATGC-GTTGG 213296 | |||||| ||| | ||||| ||||| | | | || |||| | | || | | Sbjct 6755 AGATCTCCGCGTTCACCTTCTGCGCCTCGGCGCTCACAAACGGCA-GACGAAGCAGAATG 6697 Query 213297 AACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG 213356 ||| |||| ||||||||||| || || | ||||| ||| | || | || || | | Sbjct 6696 AACGCATCCGCCAGCCCCTGCACGCCCACGCCGACGGGACGGTTGCGCATATT-GCTGCG 6638 Query 213357 GAGC-ACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGC 213415 | || | ||| | ||||| |||| | ||| || | || |||||||| ||| Sbjct 6637 GCGCGCCGTCTCAACCGGGTAGTAGTTACGGTCAATCACGCGATTCAGGTTGCGTGTGAT 6578 Query 213416 CACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGTCCTGCACAAA 213475 || ||||| | || || ||| | | | || | | || | ||| || Sbjct 6577 TTGCTTCGTGACGGTGTAGAGCAGCTGGTGGTCCACCTCGCGCTTCTCCTCGTTCACGAA 6518 Query 213476 CTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCT---GAGAGTCTGTGTA 213532 |||||||||||| ||| |||||||| || ||| ||||| | ||| ||||| Sbjct 6517 GCGCGGCAGGGCGATGGAGGCGAGGTTGCACACCGCCGTCTCCTCTGGCGAG---GTGTA 6461 Query 213533 CTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGA 213592 ||| | ||||| ||||||||||| ||| ||||||||| ||||||| ||||| || Sbjct 6460 CTCGACAATCTCCGTGCACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTAGA 6401 Query 213593 CTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACAC 213652 ||| |||| | ||||||||| || ||| | || || ||||| | ||| ||| | Sbjct 6400 CTTACTGTTGCACGCATCCTTGTAAAGGATGAACGGCACGCCTGTCTCGATCTGCGACTC 6341 Query 213653 CAGTATCTGGCTCCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAG 213711 || || | ||| | | |||| |||| | | | || ||| | | | | | Sbjct 6340 GAGGATGGCGAACCACACCT-CCTGCGCCTGAATCGTCTGC---ACACCGCGGCCCTCCG 6285 Query 213712 CCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCC---CCAGACCCTGTCCAGTCCCG 213768 ||||||| | || || || | ||| || | ||| ||| | ||| || || | Sbjct 6284 CCTCGTAACGCTCATACAGACGCTCGAACTCCTCGCCGTAGCAGTCGCTG---AGACCTG 6228 Query 213769 GACAGGATG--CGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAA 213826 |||||| || |||| | ||| || |||| | ||| || | || | || |||||| Sbjct 6227 GACAGG-TGCTCGGGTC-CATCAGCGTCCACTTCCCCTCCGACTTCACACGCTTCATGAA 6170 Query 213827 CAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGA 213886 ||||| || | |||||||||| ||||||||| | | | | |||||| || | Sbjct 6169 GAGGTCGGGAATCCACAGCGCGTAGAACAGGTCGCGTGCACGCTGGTCGTCCTTGCCGGT 6110 Query 213887 GTT---TTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGAT 213943 ||| || |||| ||||| | |||||||| |||||||||||||| | || | Sbjct 6109 GTTACGCTTCAGCAG---CAGAAACCCGAAGATGTCGGCGTGCCACGGCTCAAGATACAC 6053 Query 213944 GGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAA 214000 ||||||||| || | ||| ||| ||||||||||| | ||| ||||||| Sbjct 6052 GGCAAAGGCACCTTTGCGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAA 5993 Query 214001 GATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCC 214060 || ||||| | |||||||| || || ||| || || || || || || || ||| Sbjct 5992 GACACGCAGCATGGGTACCAAACCATTTGACGTGCCATTCGTGCCGGCGATGTAGCTGCC 5933 Query 214061 GGAGGCCCTCAGGT--TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATCATG 214118 || || | | || ||| |||| | | || ||||| ||||| |||| ||| | | Sbjct 5932 GGCGGAGCGAATGTTGTGCACATGCAAA--CCAATGCCGCCGGCAGCCTTGCTGATGACG 5875 Query 214119 GCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCAT-CTGTGAGGTTCAGC-A 214176 || || | ||| || || ||| || | || ||||| | || || | || | | Sbjct 5874 GCACACTCCTTCAGTGTATCGTAGATACCATCAATACTGTCTTCCTTCGACG--CAACGA 5817 Query 214177 AGAAGC---AGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGGGCTGG 214233 ||||| ||||| | ||| ||| | | || ||||| |||||| || || ||| | | Sbjct 5816 GGAAGCAAGAGCTC---ATCTGCGGCTTCGGCGTGCCAGCGTTGAAGAGGGTCGGGGTAG 5760 Query 214234 CATG 214237 | || Sbjct 5759 CGTG 5756 >seq5764 Length=2049 Score = 199 bits (220), Expect = 7e-46 Identities = 561/854 (66%), Gaps = 13/854 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | ||||| |||||||| ||||| |||| || |||||| |||| Sbjct 1988 CTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTC 1929 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| |||||| | | ||| || | ||| |||| | | ||||| Sbjct 1928 CATGAAGTCGAAGGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAG 1869 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | ||||||||| |||||||||| | ||||| || ||||||||| || || Sbjct 1868 CCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCG 1809 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 ||| |||| || | || |||||| ||| || | ||| || ||| | | |||| Sbjct 1808 CACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTC 1749 Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGC---AGGTGCTTGGCATAGAGCATGCAGGC 48135 | ||||| ||| || ||| || | |||| | || |||| ||| || Sbjct 1748 CAGCACGCG---CTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGC 1692 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| |||||| ||| ||||| || ||| ||| ||||| ||| | || || Sbjct 1691 GAAGTCCGTGTGCAGGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGG 1632 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | ||| | || || |||||||| | || ||| || || |||||||||||||| Sbjct 1631 CATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCC 1572 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAG-AAGCGTTCTTGTCTGAGATCC 48314 ||||| || || || || | |||| ||| | ||||| ||| || | ||||| Sbjct 1571 TTCCACCGCGGCAAAGCCGATCAGCCGCTC-CTGAAAGCTCGCGCCGCTGCC---GATCC 1516 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374 | | |||||| || |||||||||| |||||| || ||||||| || || | | | Sbjct 1515 ACCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCA 1456 Query 48375 GCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAG 48434 || | ||| | ||||| | || || |||||| | |||| |||| | Sbjct 1455 GCCGCAGCTTCTCCGCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCG 1396 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | ||||| || | |||||| |||||||| || | ||||| ||||| || Sbjct 1395 AGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCA 1336 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | || | ||| | || | || ||||| | || ||||| || | || |||| Sbjct 1335 CGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGA 1276 Query 48555 AGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTA 48614 | ||||| || || || | ||| || ||||| || | | || | |||| ||| | Sbjct 1275 ACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTCTCCCAGTCCTTCA 1216 Query 48615 CGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGA-CGCGAGTGCTTTTTTGTAC 48673 ||| ||||||||||| | || |||| ||||||| | | | | ||| | |||||| Sbjct 1215 TGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCTGC-TCCTTGTAC 1157 Query 48674 ATGCCCCATATGTC 48687 ||| ||| ||||| Sbjct 1156 TTGCGCCAGATGTC 1143 >seq2242 Length=2422 Score = 199 bits (220), Expect = 7e-46 Identities = 561/854 (66%), Gaps = 13/854 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | ||||| |||||||| ||||| |||| || |||||| |||| Sbjct 912 CTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTC 853 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| |||||| | | ||| || | ||| |||| | | ||||| Sbjct 852 CATGAAGTCGAAGGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAG 793 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | ||||||||| |||||||||| | ||||| || ||||||||| || || Sbjct 792 CCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCG 733 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 ||| |||| || | || |||||| ||| || | ||| || ||| | | |||| Sbjct 732 CACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTC 673 Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGC---AGGTGCTTGGCATAGAGCATGCAGGC 48135 | ||||| ||| || ||| || | |||| | || |||| ||| || Sbjct 672 CAGCACGCG---CTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGC 616 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| |||||| ||| ||||| || ||| ||| ||||| ||| | || || Sbjct 615 GAAGTCCGTGTGCAGGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGG 556 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | ||| | || || |||||||| | || ||| || || |||||||||||||| Sbjct 555 CATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCC 496 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAG-AAGCGTTCTTGTCTGAGATCC 48314 ||||| || || || || | |||| ||| | ||||| ||| || | ||||| Sbjct 495 TTCCACCGCGGCAAAGCCGATCAGCCGCTC-CTGAAAGCTCGCGCCGCTGCC---GATCC 440 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374 | | |||||| || |||||||||| |||||| || ||||||| || || | | | Sbjct 439 ACCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCA 380 Query 48375 GCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAG 48434 || | ||| | ||||| | || || |||||| | |||| |||| | Sbjct 379 GCCGCAGCTTCTCCGCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCG 320 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | ||||| || | |||||| |||||||| || | ||||| ||||| || Sbjct 319 AGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCA 260 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | || | ||| | || | || ||||| | || ||||| || | || |||| Sbjct 259 CGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGA 200 Query 48555 AGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTA 48614 | ||||| || || || | ||| || ||||| || | | || | |||| ||| | Sbjct 199 ACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTCTCCCAGTCCTTCA 140 Query 48615 CGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGA-CGCGAGTGCTTTTTTGTAC 48673 ||| ||||||||||| | || |||| ||||||| | | | | ||| | |||||| Sbjct 139 TGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCTGC-TCCTTGTAC 81 Query 48674 ATGCCCCATATGTC 48687 ||| ||| ||||| Sbjct 80 TTGCGCCAGATGTC 67 >seq1335 Length=2956 Score = 199 bits (220), Expect = 7e-46 Identities = 561/854 (66%), Gaps = 13/854 (2%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | ||||| |||||||| ||||| |||| || |||||| |||| Sbjct 2045 CTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTC 2104 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| |||||| | | ||| || | ||| |||| | | ||||| Sbjct 2105 CATGAAGTCGAAGGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAG 2164 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | ||||||||| |||||||||| | ||||| || ||||||||| || || Sbjct 2165 CCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCG 2224 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 ||| |||| || | || |||||| ||| || | ||| || ||| | | |||| Sbjct 2225 CACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTC 2284 Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGC---AGGTGCTTGGCATAGAGCATGCAGGC 48135 | ||||| ||| || ||| || | |||| | || |||| ||| || Sbjct 2285 CAGCACGCG---CTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGC 2341 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| |||||| ||| ||||| || ||| ||| ||||| ||| | || || Sbjct 2342 GAAGTCCGTGTGCAGGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGG 2401 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | ||| | || || |||||||| | || ||| || || |||||||||||||| Sbjct 2402 CATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCC 2461 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAG-AAGCGTTCTTGTCTGAGATCC 48314 ||||| || || || || | |||| ||| | ||||| ||| || | ||||| Sbjct 2462 TTCCACCGCGGCAAAGCCGATCAGCCGCTC-CTGAAAGCTCGCGCCGCTGCC---GATCC 2517 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374 | | |||||| || |||||||||| |||||| || ||||||| || || | | | Sbjct 2518 ACCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCA 2577 Query 48375 GCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAG 48434 || | ||| | ||||| | || || |||||| | |||| |||| | Sbjct 2578 GCCGCAGCTTCTCCGCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCG 2637 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | ||||| || | |||||| |||||||| || | ||||| ||||| || Sbjct 2638 AGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCA 2697 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | || | ||| | || | || ||||| | || ||||| || | || |||| Sbjct 2698 CGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGA 2757 Query 48555 AGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTA 48614 | ||||| || || || | ||| || ||||| || | | || | |||| ||| | Sbjct 2758 ACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTCTCCCAGTCCTTCA 2817 Query 48615 CGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGA-CGCGAGTGCTTTTTTGTAC 48673 ||| ||||||||||| | || |||| ||||||| | | | | ||| | |||||| Sbjct 2818 TGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCTGC-TCCTTGTAC 2876 Query 48674 ATGCCCCATATGTC 48687 ||| ||| ||||| Sbjct 2877 TTGCGCCAGATGTC 2890 >seq1327 Length=1320 Score = 199 bits (220), Expect = 7e-46 Identities = 561/854 (66%), Gaps = 13/854 (2%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || ||||| | ||||| |||||||| ||||| |||| || |||||| |||| Sbjct 1259 CTGGTACTCGCCCACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTC 1200 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958 ||||||| |||||| | | ||| || | ||| |||| | | ||||| Sbjct 1199 CATGAAGTCGAAGGGCTGCGTCACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAG 1140 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 | ||||||||| |||||||||| | ||||| || ||||||||| || || Sbjct 1139 CCGGTCCGCGACGAACTCGATGTACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCG 1080 Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078 ||| |||| || | || |||||| ||| || | ||| || ||| | | |||| Sbjct 1079 CACCGGCAGCGCGTCGCAGATAAACTCACGCTCGATGTTCACCGCGTCCACGATGATCTC 1020 Query 48079 CTTAACGCGGGACTCTGAGGGTTTGTTGCGC---AGGTGCTTGGCATAGAGCATGCAGGC 48135 | ||||| ||| || ||| || | |||| | || |||| ||| || Sbjct 1019 CAGCACGCG---CTCGCGCGGCAGCTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGC 963 Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195 |||||| |||||| ||| ||||| || ||| ||| ||||| ||| | || || Sbjct 962 GAAGTCCGTGTGCAGGCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGG 903 Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255 ||| | ||| | || || |||||||| | || ||| || || |||||||||||||| Sbjct 902 CATCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCC 843 Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAG-AAGCGTTCTTGTCTGAGATCC 48314 ||||| || || || || | |||| ||| | ||||| ||| || | ||||| Sbjct 842 TTCCACCGCGGCAAAGCCGATCAGCCGCTC-CTGAAAGCTCGCGCCGCTGCC---GATCC 787 Query 48315 AGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGA 48374 | | |||||| || |||||||||| |||||| || ||||||| || || | | | Sbjct 786 ACCGCACCGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCA 727 Query 48375 GCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCAG 48434 || | ||| | ||||| | || || |||||| | |||| |||| | Sbjct 726 GCCGCAGCTTCTCCGCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCG 667 Query 48435 AGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCA 48494 |||| | ||||| || | |||||| |||||||| || | ||||| ||||| || Sbjct 666 AGTGAATGTTCTCCATCATCAACTGGAAGCCGTAGAACGCGCGCGCCTCCGGCACCTTCA 607 Query 48495 CTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGA 48554 | || | ||| | || | || ||||| | || ||||| || | || |||| Sbjct 606 CGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCGTCGCTGCCGGCGAAGA 547 Query 48555 AGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGTA 48614 | ||||| || || || | ||| || ||||| || | | || | |||| ||| | Sbjct 546 ACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGCCTCTCCCAGTCCTTCA 487 Query 48615 CGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGA-CGCGAGTGCTTTTTTGTAC 48673 ||| ||||||||||| | || |||| ||||||| | | | | ||| | |||||| Sbjct 486 TGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTCTCCTGC-TCCTTGTAC 428 Query 48674 ATGCCCCATATGTC 48687 ||| ||| ||||| Sbjct 427 TTGCGCCAGATGTC 414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931462282967040