Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq4147 105 8e-18 >seq4147 Length=10003 Score = 105 bits (116), Expect = 8e-18 Identities = 511/799 (64%), Gaps = 13/799 (2%) Strand=Plus/Plus Query 75275 GAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTCAAT 75334 ||||| ||||| |||||| | ||| | |||| ||||| || || ||||||||||| Sbjct 5720 GAGACGTACGAGCTGATGTCGAAGGGTTTCTTCACGCACGCTACCCCGACCCTCTTCAAC 5779 Query 75335 GCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCA 75394 ||||| || || | ||||||||| | ||||||||| | || ||||| ||| Sbjct 5780 GCTGGCACGCCGAAGCCGCAGATGAGCTCTTGCTTCCTCGTTGCGTCGAAGGAAGACAGT 5839 Query 75395 ATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGT 75454 || | |||||||| | || || | ||||||||| ||| ||| || || || Sbjct 5840 ATTGATGGTATCTACGATACACTGAAGGAGTGTGCCGTCATCAGCAAGGCTGCCGGCGGC 5899 Query 75455 ATTGGGATGCACATCCATGATGTGAGAGCCAATAA-ATCTCGTATTCGGGGGACAAATGG 75513 ||||| |||| | || | | | || | || || || || ||||| Sbjct 5900 ATTGGTTTGCATGTGCACAACATTCGCTCCGCCGGCAGCTAC-ATCGCCGGCACGAATGG 5958 Query 75514 TCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAA 75573 ||| ||||| | | || ||||| || || || ||| ||| || ||||| || | Sbjct 5959 CACGTCAAATGGTTTGGTACCCATGCTGCGTGTCTTCAACAACACCGCCCGCTACGTGGA 6018 Query 75574 TCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGCCGA 75630 || | || || ||||| || || | || || || | || || ||||| ||||| Sbjct 6019 CCAGGGTGGCGGTAAGCGCAAAGGTGCCTTTGCCGTGTATCTTGAGCCGTGGCACGCCGA 6078 Query 75631 TATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTA-GAG 75689 ||| | | ||| || | | | ||| || | || || || || | | | Sbjct 6079 CATCTTCGGGTTTCTGCTGCTGAAGCGTAACACCGGCAAGGACGACCAGCG-TGCACGCG 6137 Query 75690 ATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTC 75749 | || || | | ||||||||||| ||||| ||||||||||| || || || || Sbjct 6138 ACCTGTTCTACGCGCTGTGGATTCCCGACCTCTTCATGAAGCGTGTGAAGTCGGAGGGGA 6197 Query 75750 AATGGTCTCTTTTCTGTCCAGA-CAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAG 75808 | ||| | || | | || || || ||||||||| |||| || |||||| Sbjct 6198 AGTGGACGCTGATG-GACCCGAGCACCTGTCCAGGTCTCAGCGACTGCTACGGCGAGGAG 6256 Query 75809 TTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGC-GACTGTACCAGC 75867 || || || || || || | |||||| | | ||| ||| | | || Sbjct 6257 TTCGAGCGTCTGTATGAGCGTTACGAGGCGGAGGGCCGCGGTG-TGCAGACGATTC-AGG 6314 Query 75868 CGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGC 75926 ||| | | || ||| || || ||| | || |||| ||||| || || | || | Sbjct 6315 CGCAGGAGGTGTGGTTCGCCATCCTCGAGTCGCAGATCGAGACAGGCGTGCCGTTCATCC 6374 Query 75927 TTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCT 75986 ||||||||||||| || |||| ||| |||||| ||||| | || || |||||| ||| Sbjct 6375 TTTACAAGGATGCGTGCAACAGTAAGTCTAACCAGAAGAACCTCGGCACCATCAAGTGCT 6434 Query 75987 CAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATT 76046 | || || |||||||| ||| | |||||||| || |||||||| || ||||| Sbjct 6435 CGAACCTGTGCACGGAGATTGTCGAGTACACCTCGCCAGAGGAGACGGCGGTGTGCAACC 6494 Query 76047 TGGCATCAATCGCCCTTCC 76065 | || || |||||||| || Sbjct 6495 TCGCCTCCATCGCCCTGCC 6513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596524439681280