Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq5764 188 1e-41 seq2242 188 1e-41 seq1335 188 1e-41 seq1327 188 1e-41 seq4147 127 3e-23 seq686 102 1e-15 seq4459 98.7 2e-14 >seq5764 Length=2049 Score = 188 bits (208), Expect = 1e-41 Identities = 251/342 (73%), Gaps = 14/342 (4%) Strand=Plus/Minus Query 793869 GACGTCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCG 793928 ||||| | |||||| ||| | ||||||||||| ||||||||||| | |||| Sbjct 2020 GACGTGCCCTCCGTGCTCA---TCACGCCCGCCTTCTGGTACTCGCCCACCTTCTTCTCG 1964 Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||||| |||||||||| |||||| | ||| ||| || |||| Sbjct 1963 AAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA-GGGCTG--CGTC 1907 Query 793989 AGGT---AGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATG 794045 | || |||||||||| ||| |||||| ||||||| ||||| |||||||| || ||| Sbjct 1906 ACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGACGAACTCGATG 1847 Query 794046 TACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA 794105 ||||| |||| || | |||||||||||||| ||| ||| ||||||| |||| || | Sbjct 1846 TACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCGCGTCGCAGATA 1787 Query 794106 AACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGACGG 794164 ||||| |||||| | || || || | |||||||| || | | || ||| || | | Sbjct 1786 AACTCACGCTCGATGTTCACCGCGTCCACGATGATCT-CCAGCACGCGCTCGCGCGGCAG 1728 Query 794165 CTTG---TCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 794203 |||| | || | || |||| |||||||| || ||||| Sbjct 1727 CTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTC 1686 Score = 132 bits (146), Expect = 8e-25 Identities = 224/323 (69%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||| |||||||| || | ||| ||||| || ||||||||| Sbjct 1675 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCTTC 1616 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || | || ||||| |||||||| |||||||| || || ||||||||| Sbjct 1615 TTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCAAAG 1556 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||| |||||||| ||| | | || | || ||||||| || ||||||| Sbjct 1555 CCGATCAGCCGCTCCTGAAA---GCTCGCGC---CGCTGCCGATCCACCGCACCGCCCAC 1502 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| ||| | | || | ||| | ||| ||| | | || | |||||| Sbjct 1501 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 1442 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | |||| ||| ||| ||||| | || | |||||| ||||| ||||| ||||| || Sbjct 1441 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 1382 Query 794641 ATGGCGATCTGGAAGCCATAAAA 794663 || | ||||||||| || || Sbjct 1381 ATCATCAACTGGAAGCCGTAGAA 1359 Score = 125 bits (138), Expect = 1e-22 Identities = 188/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || || | || || |||||||||| || |||||||| |||||| ||| Sbjct 1351 GCCTCCGGCACCTTCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCG 1292 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||| ||||||| || || || ||||||||||| ||||| ||||| ||||| | ||| Sbjct 1291 TCGCTGCCGGCGAAGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGC 1232 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 |||||| | ||||| ||| ||||||| |||||| ||||| | | || | Sbjct 1231 CTCTCCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTC 1172 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || ||||| ||| |||||||| || |||| Sbjct 1171 TCCTGCTCCTTGTACTTGCGCCAGATGTCGTGGTACACGATCGGGAACAGCACGTAGCGG 1112 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 |||||||| | ||||||||||| Sbjct 1111 AACGGGTTCTCCTGCTGCAGCGGCTCG 1085 >seq2242 Length=2422 Score = 188 bits (208), Expect = 1e-41 Identities = 251/342 (73%), Gaps = 14/342 (4%) Strand=Plus/Minus Query 793869 GACGTCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCG 793928 ||||| | |||||| ||| | ||||||||||| ||||||||||| | |||| Sbjct 944 GACGTGCCCTCCGTGCTCA---TCACGCCCGCCTTCTGGTACTCGCCCACCTTCTTCTCG 888 Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||||| |||||||||| |||||| | ||| ||| || |||| Sbjct 887 AAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA-GGGCTG--CGTC 831 Query 793989 AGGT---AGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATG 794045 | || |||||||||| ||| |||||| ||||||| ||||| |||||||| || ||| Sbjct 830 ACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGACGAACTCGATG 771 Query 794046 TACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA 794105 ||||| |||| || | |||||||||||||| ||| ||| ||||||| |||| || | Sbjct 770 TACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCGCGTCGCAGATA 711 Query 794106 AACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGACGG 794164 ||||| |||||| | || || || | |||||||| || | | || ||| || | | Sbjct 710 AACTCACGCTCGATGTTCACCGCGTCCACGATGATCT-CCAGCACGCGCTCGCGCGGCAG 652 Query 794165 CTTG---TCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 794203 |||| | || | || |||| |||||||| || ||||| Sbjct 651 CTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTC 610 Score = 132 bits (146), Expect = 8e-25 Identities = 224/323 (69%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||| |||||||| || | ||| ||||| || ||||||||| Sbjct 599 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCTTC 540 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || | || ||||| |||||||| |||||||| || || ||||||||| Sbjct 539 TTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCAAAG 480 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||| |||||||| ||| | | || | || ||||||| || ||||||| Sbjct 479 CCGATCAGCCGCTCCTGAAA---GCTCGCGC---CGCTGCCGATCCACCGCACCGCCCAC 426 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| ||| | | || | ||| | ||| ||| | | || | |||||| Sbjct 425 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 366 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | |||| ||| ||| ||||| | || | |||||| ||||| ||||| ||||| || Sbjct 365 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 306 Query 794641 ATGGCGATCTGGAAGCCATAAAA 794663 || | ||||||||| || || Sbjct 305 ATCATCAACTGGAAGCCGTAGAA 283 Score = 125 bits (138), Expect = 1e-22 Identities = 188/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || || | || || |||||||||| || |||||||| |||||| ||| Sbjct 275 GCCTCCGGCACCTTCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCG 216 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||| ||||||| || || || ||||||||||| ||||| ||||| ||||| | ||| Sbjct 215 TCGCTGCCGGCGAAGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGC 156 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 |||||| | ||||| ||| ||||||| |||||| ||||| | | || | Sbjct 155 CTCTCCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTC 96 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || ||||| ||| |||||||| || |||| Sbjct 95 TCCTGCTCCTTGTACTTGCGCCAGATGTCGTGGTACACGATCGGGAACAGCACGTAGCGG 36 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 |||||||| | ||||||||||| Sbjct 35 AACGGGTTCTCCTGCTGCAGCGGCTCG 9 >seq1335 Length=2956 Score = 188 bits (208), Expect = 1e-41 Identities = 251/342 (73%), Gaps = 14/342 (4%) Strand=Plus/Plus Query 793869 GACGTCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCG 793928 ||||| | |||||| ||| | ||||||||||| ||||||||||| | |||| Sbjct 2013 GACGTGCCCTCCGTGCTCA---TCACGCCCGCCTTCTGGTACTCGCCCACCTTCTTCTCG 2069 Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||||| |||||||||| |||||| | ||| ||| || |||| Sbjct 2070 AAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA-GGGCTG--CGTC 2126 Query 793989 AGGT---AGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATG 794045 | || |||||||||| ||| |||||| ||||||| ||||| |||||||| || ||| Sbjct 2127 ACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGACGAACTCGATG 2186 Query 794046 TACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA 794105 ||||| |||| || | |||||||||||||| ||| ||| ||||||| |||| || | Sbjct 2187 TACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCGCGTCGCAGATA 2246 Query 794106 AACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGACGG 794164 ||||| |||||| | || || || | |||||||| || | | || ||| || | | Sbjct 2247 AACTCACGCTCGATGTTCACCGCGTCCACGATGATCT-CCAGCACGCGCTCGCGCGGCAG 2305 Query 794165 CTTG---TCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 794203 |||| | || | || |||| |||||||| || ||||| Sbjct 2306 CTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTC 2347 Score = 132 bits (146), Expect = 8e-25 Identities = 224/323 (69%), Gaps = 6/323 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||| |||||||| || | ||| ||||| || ||||||||| Sbjct 2358 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCTTC 2417 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || | || ||||| |||||||| |||||||| || || ||||||||| Sbjct 2418 TTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCAAAG 2477 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||| |||||||| ||| | | || | || ||||||| || ||||||| Sbjct 2478 CCGATCAGCCGCTCCTGAAA---GCTCGCGC---CGCTGCCGATCCACCGCACCGCCCAC 2531 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| ||| | | || | ||| | ||| ||| | | || | |||||| Sbjct 2532 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 2591 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | |||| ||| ||| ||||| | || | |||||| ||||| ||||| ||||| || Sbjct 2592 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 2651 Query 794641 ATGGCGATCTGGAAGCCATAAAA 794663 || | ||||||||| || || Sbjct 2652 ATCATCAACTGGAAGCCGTAGAA 2674 Score = 125 bits (138), Expect = 1e-22 Identities = 188/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || || | || || |||||||||| || |||||||| |||||| ||| Sbjct 2682 GCCTCCGGCACCTTCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCG 2741 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||| ||||||| || || || ||||||||||| ||||| ||||| ||||| | ||| Sbjct 2742 TCGCTGCCGGCGAAGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGC 2801 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 |||||| | ||||| ||| ||||||| |||||| ||||| | | || | Sbjct 2802 CTCTCCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTC 2861 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || ||||| ||| |||||||| || |||| Sbjct 2862 TCCTGCTCCTTGTACTTGCGCCAGATGTCGTGGTACACGATCGGGAACAGCACGTAGCGG 2921 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 |||||||| | ||||||||||| Sbjct 2922 AACGGGTTCTCCTGCTGCAGCGGCTCG 2948 >seq1327 Length=1320 Score = 188 bits (208), Expect = 1e-41 Identities = 251/342 (73%), Gaps = 14/342 (4%) Strand=Plus/Minus Query 793869 GACGTCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCG 793928 ||||| | |||||| ||| | ||||||||||| ||||||||||| | |||| Sbjct 1291 GACGTGCCCTCCGTGCTCA---TCACGCCCGCCTTCTGGTACTCGCCCACCTTCTTCTCG 1235 Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||||| |||||||||| |||||| | ||| ||| || |||| Sbjct 1234 AAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA-GGGCTG--CGTC 1178 Query 793989 AGGT---AGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATG 794045 | || |||||||||| ||| |||||| ||||||| ||||| |||||||| || ||| Sbjct 1177 ACGTTGTAGTGCTTCTCCAGCCCCAGCGACACAAGCAGCCGGTCCGCGACGAACTCGATG 1118 Query 794046 TACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA 794105 ||||| |||| || | |||||||||||||| ||| ||| ||||||| |||| || | Sbjct 1117 TACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCGCGTCGCAGATA 1058 Query 794106 AACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGACGG 794164 ||||| |||||| | || || || | |||||||| || | | || ||| || | | Sbjct 1057 AACTCACGCTCGATGTTCACCGCGTCCACGATGATCT-CCAGCACGCGCTCGCGCGGCAG 999 Query 794165 CTTG---TCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 794203 |||| | || | || |||| |||||||| || ||||| Sbjct 998 CTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTC 957 Score = 132 bits (146), Expect = 8e-25 Identities = 224/323 (69%), Gaps = 6/323 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||| |||||||| || | ||| ||||| || ||||||||| Sbjct 946 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAAGCCCGGCATCAGCCCGCGCTTC 887 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || | || ||||| |||||||| |||||||| || || ||||||||| Sbjct 886 TTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCCTTCCACCGCGGCAAAG 827 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||| |||||||| ||| | | || | || ||||||| || ||||||| Sbjct 826 CCGATCAGCCGCTCCTGAAA---GCTCGCGC---CGCTGCCGATCCACCGCACCGCCCAC 773 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 || ||||| ||| | | || | ||| | ||| ||| | | || | |||||| Sbjct 772 TCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGCGTGCAGCAGCCGCAGCTTCTCC 713 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | |||| ||| ||| ||||| | || | |||||| ||||| ||||| ||||| || Sbjct 712 GCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGAATGTTCTCC 653 Query 794641 ATGGCGATCTGGAAGCCATAAAA 794663 || | ||||||||| || || Sbjct 652 ATCATCAACTGGAAGCCGTAGAA 630 Score = 125 bits (138), Expect = 1e-22 Identities = 188/267 (70%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || || | || || |||||||||| || |||||||| |||||| ||| Sbjct 622 GCCTCCGGCACCTTCACGTCGCTCATGAAGCGCTGCGCGAGGTTCTCGATCACGATCCCG 563 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||| ||||||| || || || ||||||||||| ||||| ||||| ||||| | ||| Sbjct 562 TCGCTGCCGGCGAAGAACGCAAGCACGTGCTTGATGAAGTGCCGCTCCCCGTCGTTCAGC 503 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 |||||| | ||||| ||| ||||||| |||||| ||||| | | || | Sbjct 502 CTCTCCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTC 443 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || ||||| ||| |||||||| || |||| Sbjct 442 TCCTGCTCCTTGTACTTGCGCCAGATGTCGTGGTACACGATCGGGAACAGCACGTAGCGG 383 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 |||||||| | ||||||||||| Sbjct 382 AACGGGTTCTCCTGCTGCAGCGGCTCG 356 >seq4147 Length=10003 Score = 127 bits (140), Expect = 3e-23 Identities = 192/267 (72%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599 |||||| || ||||| || |||| ||| ||||| || |||||||| || | || || || Sbjct 6022 CTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACACGCAGCATGGGTACCAAACCATTTGA 5963 Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCG-GCAAAGC 2073658 | ||| || ||||| || | |||| ||| | || ||| | |||||| | ||||| | Sbjct 5962 CGTGCCATTCGTGCCGGCGATGTAGCTGCCGGCGGAGCGAATGTTGTGCACATGCAAA-C 5904 Query 2073659 CGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCT 2073718 | ||||||||||| |||||| ||||| || |||| ||||| || |||||||| || | Sbjct 5903 CAATGCCGCCGGCAGCCTTGCTGATGACGGCACACTCCTTCAGTGTATCGTAGATACCAT 5844 Query 2073719 CGATCGAGTCGGCCTTC-ATGTCCAAC-AGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 | || ||| ||||| | | |||| || ||||| || | ||||| || ||| Sbjct 5843 CAATACTGTCTTCCTTCGACG--CAACGAGGAAGCAAGAGCTCATCTGCGGCTTCGGCGT 5786 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGC 2073803 ||| || |||||||| || || || || Sbjct 5785 GCCAGCGTTGAAGAGGGTCGGGGTAGC 5759 Score = 109 bits (120), Expect = 9e-18 Identities = 353/542 (65%), Gaps = 12/542 (2%) Strand=Plus/Minus Query 2069254 TCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTC 2069313 || ||||| |||| || || | |||||| | | ||||||||| ||||||| || ||| Sbjct 7425 TCCACGGTGAACTTAATCGCATCGGCGGCCGCCTTGGTGCGCAGGTAGTACACACCCGTC 7366 Query 2069314 TTGAGGCCGCGACGCC-ACGCGTAGGCGTGCATCGACGTGATGGACTCGGCATTCGGGA- 2069371 ||||| || |||| || ||| |||| | ||||||||||||| | | | ||| Sbjct 7365 TTGAGCCC-CGACTCCCACGTGTAGAAGAGCATCGACGTGATTTGGCCAGAGGTGGGGCT 7307 Query 2069372 CGGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCCA 2069431 | ||| | | || || ||||||||| ||||||| || | | |||||| |||| Sbjct 7306 CTGCAAAA-ACAGATTCAGCGACTGGGATTGGTCGATGTACTGGCCACGGTCGCGGGCCA 7248 Query 2069432 TGTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAGATGCG 2069491 |||| || | ||| | | | ||||||||| || | | || |||| || | Sbjct 7247 TGTCAATCAGCTTGCGCTGCGGGATCTCCCACACCGTACGGTAGAGCTCCTTCAGGTCGT 7188 Query 2069492 GCGGCACCTCGTCG-TCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGGTCG 2069550 ||| | |||| || ||| | | ||||| | | ||||| || | Sbjct 7187 CCGGAATACCGTCAATCGTCA-------GGATGGAGCCGTTGAAGGTGATGATCTCGTTG 7135 Query 2069551 CGAAAGTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGACC 2069610 || | | |||||||||| ||| || | | | || |||| ||| || Sbjct 7134 CGCATGGTTTCATTCCACAGGCCTCGCTTGATGAGGTCCATCACAAGGTACTTGTTCACG 7075 Query 2069611 ACGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCAC 2069670 || | || ||||| ||||| ||||| ||||||||| |||| | |||| | Sbjct 7074 ACCGGGAACTCGCCGCTCAGCACACGGCGGACGTAGATGTTCGAGGTGAAGGGCTCGAAG 7015 Query 2069671 GCCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGC 2069730 ||| ||||||| || |||||||| || | || |||||||| |||| || |||||| Sbjct 7014 CACTCATTGTTGCCAAGAATCTGCGAGGTGGACGCAGTGGGCATCGGCGCAACCAGCAGC 6955 Query 2069731 GAGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCAGCGGCCG 2069790 ||||| |||| ||| ||| |||| | || ||| ||||||||||||||||||| Sbjct 6954 GAGTTCCGCATACCGACCTGCACCACCTTCTCCTTGAGGCTGTCCCAGTCCCAGCGGCCG 6895 Query 2069791 CT 2069792 || Sbjct 6894 CT 6893 Score = 93.3 bits (102), Expect = 7e-13 Identities = 294/462 (64%), Gaps = 0/462 (0%) Strand=Plus/Minus Query 2071551 CGCTGTCTCCGTTGGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGT 2071610 ||| |||||| |||||| | ||| ||| | ||| ||||||||||| | || | | Sbjct 6484 CGCCGTCTCCTCTGGCGAGGTGTACTCGACAATCTCCGTGCACAGGTTCGAGCACTTGAT 6425 Query 2071611 GGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGG 2071670 |||||| ||||||| |||||| | |||| || ||||||| || ||| | || Sbjct 6424 GGTGCCGAGGTTCTTCTGGTTAGACTTACTGTTGCACGCATCCTTGTAAAGGATGAACGG 6365 Query 2071671 CGCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGA 2071730 | | || ||||||||||||| | || |||||| |||| | | |||| | | || Sbjct 6364 CACGCCTGTCTCGATCTGCGACTCGAGGATGGCGAACCACACCTCCTGCGCCTGAATCGT 6305 Query 2071731 GGTCCTCGCGCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCCGTG 2071790 | ||||||||| | || || || | |||||| Sbjct 6304 CTGCACACCGCGGCCCTCCGCCTCGTAACGCTCATACAGACGCTCGAACTCCTCGCCGTA 6245 Query 2071791 GCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCAC 2071850 ||| ||| || || || | |||| | |||| ||| | || | | | Sbjct 6244 GCAGTCGCTGAGACCTGGACAGGTGCTCGGGTCCATCAGCGTCCACTTCCCCTCCGACTT 6185 Query 2071851 CACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTT 2071910 ||| || ||| || |||||| ||||||| |||| || || ||||| || || | Sbjct 6184 CACACGCTTCATGAAGAGGTCGGGAATCCACAGCGCGTAGAACAGGTCGCGTGCACGCTG 6125 Query 2071911 CTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGG 2071970 || ||||||||| ||| ||||| || | ||| || ||||||||||||||| Sbjct 6124 GTCGTCCTTGCCGGTGTTACGCTTCAGCAGCAGAAACCCGAAGATGTCGGCGTGCCACGG 6065 Query 2071971 CTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||| || || ||||||||| || |||||||| ||||| || Sbjct 6064 CTCAAGATACACGGCAAAGGCACCTTTGCGCTTACCGCCACC 6023 >seq686 Length=5112 Score = 102 bits (112), Expect = 1e-15 Identities = 206/298 (69%), Gaps = 17/298 (6%) Strand=Plus/Plus Query 652894 CGAGGTGCACCCGCTGCTCATGCTGGGCGCCTGCGCTTCCATCATCCCCTTTTCCAACCA 652953 |||| || ||||| | || |||||| |||||| || || ||||||| | ||||| Sbjct 3531 CGAGATGGACCCGTCCATGATCCTGGGCATCTGCGCCTCGATTATCCCCTACCCGAACCA 3590 Query 652954 CAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGCAGAGCAAGG---CCGT 653010 ||||||| | || ||||||| ||||||| | |||||||| |||||| || || | Sbjct 3591 CAACCAGTCCCCCCGCAACACCTACCAGTCCGCCATGGGTAAGCAGGCCATGGGGATCTA 3650 Query 653011 CGTGTCGCTCAACGCCGATCACGC-CATCGACACCGTGTCGCACGCCCTCTGCTACCCGC 653069 || |||| ||| | | || || ||| |||||| | |||| ||||| |||||| | Sbjct 3651 CGCGTCG---AACTTCCA-CATGCGCATGGACACCACCGCCCACGTCCTCTTCTACCCAC 3706 Query 653070 AGGTGCCGCTGGTGCAGAC---GGCCATGGAGGACGTCATCGGCGCCACGCGCCTCCCGA 653126 || |||| |||||| || ||||||| | || | | || ||| ||| ||| Sbjct 3707 AGAAGCCGTTGGTGCGTACAAAGGCCATGTCGTACAT--GCACAGCAACG-ACCTGCCGG 3763 Query 653127 TGGGCCAGAATGCGCGCGTGGCCATCATGAGCGAC---CCCTACAACCAGGAGGACTC 653181 |||||| || || ||||||||| | || || ||||||||| |||||||| Sbjct 3764 CGGGCCACAACGCCGTGGTGGCCATCTCGTGCTACAGTGGCTACAACCAAGAGGACTC 3821 >seq4459 Length=15143 Score = 98.7 bits (108), Expect = 2e-14 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 429059 GGAGCGATTCAAGGGCAAGGAGGGCCGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAA 429118 |||||| | ||||||||| | ||||| | |||||||| | ||||||||||| || | Sbjct 11346 GGAGCGCCTGAAGGGCAAGTACGGCCGCCTGCGCGGCAACTTAATGGGCAAGCGTGTTGA 11287 Query 429119 CTTTACGGCGCGCGCCGTCATCAGTCCCGACCCCGAAATCGACATTGACGAGGTGGGCGT 429178 ||| | ||||| | || |||| |||||| | || ||| | |||||||| || || Sbjct 11286 CTTCTCTGCGCGTACGGTGATCACCGGTGACCCCAACATTGACGTCGACGAGGTCGGTGT 11227 Query 429179 GCCCTATGAGATCGTCAAGACGCTCACCTTTCCCGAGCGCGTGA 429222 ||||| ||| || |||||| || ||||||||||| |||| Sbjct 11226 GCCCTTCTCTGTCGCCATGACGCTGACATTTCCCGAGCGGGTGA 11183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915602195658584