Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq1464 86.0 2e-12 >seq1464 Length=25142 Score = 86.0 bits (94), Expect = 2e-12 Identities = 205/309 (66%), Gaps = 6/309 (2%) Strand=Plus/Plus Query 37203 GGGCGACCTGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCAA 37262 |||||| || | | | || || ||||| ||||| ||| | ||||||||| || || Sbjct 17427 GGGCGAGCTCGCCGTGATTCCCGGCTCCATGGGAGCGCGCAGCTACATCGTTCGTGGAAA 17486 Query 37263 GGGAAATTCCGAATCG---TTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCG 37319 || | ||| || | |||||| || |||||| || || || ||||| Sbjct 17487 AGGTAG---CGAGGCGAGCTACTGCTCCTGTTCCCACGGCGCAGGGCGGCGCTACAGCCG 17543 Query 37320 GGCCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGA 37379 | || ||| || || ||||| |||| |||||| |||| ||||| || || || Sbjct 17544 TGGTGAGGCACGCCGTCGCTTCACCGTCGCGGATCACGAGGTCGCCACTTCGGGGATTGA 17603 Query 37380 GTGCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGC 37439 ||||||||| || | | ||| | |||||||| || || || |||||||||||||| | Sbjct 17604 GTGCCGCAAGGACGGCAGCGTGCTGGACGAGACCCCCGCCGCGTACAAGGACATCGACTC 17663 Query 37440 GGTCATGGCCGCGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTG 37499 ||||| | || || | |||||| || | ||| ||||| || ||| | || Sbjct 17664 CGTCATCGAGGCTCAGCGGGACCTGGTCGAGGTGGTGGCAGTACTGCGGCAGGTCTTGTG 17723 Query 37500 CGTGAAGGG 37508 ||||| || Sbjct 17724 TGTGAAAGG 17732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139273183448672