Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq3710 201 1e-46 >seq3710 Length=2726 Score = 201 bits (222), Expect = 1e-46 Identities = 415/612 (68%), Gaps = 14/612 (2%) Strand=Plus/Minus Query 146907 CAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTG 146966 |||||| |||||| | |||||||||| || ||||||||||||||| || |||||||| Sbjct 2013 CAGCTGCTCTTTCAGCGCCTCCACGTGGGTGCTGTAGACGTGCGCGTCGCCGAGGGTGTG 1954 Query 146967 CACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTA 147026 ||| | || ||||| ||||| ||| | | ||| | || || | |||||||| Sbjct 1953 CACCAGCTCACCCGGACGCAGGCCAGTCGCCTTGGCGATCAAAATCGTCAAGAGCGAGTA 1894 Query 147027 GCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 || |||||||| || || || || |||||||| | || | ||| |||||| ||| Sbjct 1893 CGACGCGATGTTGAACGGCACGCCAAGACCCATGTCGCATGAGCGCTGATACAGCATGCA 1834 Query 147087 CGAGAGCTCC-----CCGT-CGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGCAG 147140 || || ||| | || | ||||||||||| | || | |||||| ||||| || Sbjct 1833 GGACAGTTCCTTTGTCTGTGTGTTTACGTAAAACTGACCAAGCAGGTGGCATGGCGGAAG 1774 Query 147141 CGCCATGGCGGGCAGGTCCGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGG 147200 ||||| | |||| | ||||||||| |||| || | |||||| | | | || Sbjct 1773 TGCCATCTTGTGCAGAGCACAGGGGTTCCACGCCGTGAAAAGCAGCCGACGGTCATTCGG 1714 Query 147201 GTTCCTCTTAA---TCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTA 147257 |||| |||| | |||| |||| | | | | ||| |||||||| | ||| |||| Sbjct 1713 GTTCGTCTTGAGCGTCTCCACGAT---CTGCTTGATCTGATCCACGCCTTCGCCGTCGTA 1657 Query 147258 GTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGG 147317 ||| | | || || |||| || || ||||| | |||||||||||||||||| || Sbjct 1656 GTTCGCGTCAAAGCCCTTGTACTCAGCACCGAAGTGGCGCCACTGGAAGCCGTACACCGG 1597 Query 147318 CCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGC-CCGCTTGAGAAACTCGGGGGACC 147376 || ||||| | | || | | || ||||||| | | || ||||| |||| | Sbjct 1596 ACCGAGGTC-CATCACCTTGTTTTCGGTCAGCCCGCGGCTGTCAAGGAACTCACGGGAAC 1538 Query 147377 CGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCC 147436 | | ||||||||||| | ||||| | | ||| || | | ||| ||||| Sbjct 1537 CATTACCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCATTCGTCTCGCCCC 1478 Query 147437 GGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCA 147496 | | ||||| | |||||||| | || || | ||| ||||||| ||| || ||||||| Sbjct 1477 GCAGAAACCAAATTAGCTCCTCGCACACGCCACGCCAGAAGACCCGCTTCGTCGTCAGCA 1418 Query 147497 GGGGGAACTGGT 147508 | || | ||||| Sbjct 1417 GCGGCAGCTGGT 1406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583443829958400