Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20bombi_20[genbank_20GCA_5F002216605.1_202017-07-11] 6,056 sequences; 31,359,519 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq686 84.2 2e-11 >seq686 Length=5112 Score = 84.2 bits (92), Expect = 2e-11 Identities = 111/147 (76%), Gaps = 8/147 (5%) Strand=Plus/Plus Query 52767 ATGGGCGACAAGTT-TGC-GTCGTTCACGGCGCAAAAGGGGACGTGCGGAG--CCGTCCT 52822 || || |||||||| ||| |||| ||||| ||| ||||| ||| ||| | || | Sbjct 4231 ATTGGTGACAAGTTCTGCAGTCGG-CACGG-GCAGAAGGGCACGAACGGTATTCAGTTCC 4288 Query 52823 GACCCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCC 52882 ||| |||| |||||||||||| || ||||| | ||||| |||||||||||||| || Sbjct 4289 GAC--AGGAAGACATGCCCTTCAACCGCGACGGCATCGTGCCGGACCTCATCATCAATCC 4346 Query 52883 CCACGCCTTTCCCTCCAGGATGACCGT 52909 |||||| ||||||| | ||||| || Sbjct 4347 TCACGCCATTCCCTCACGCATGACGGT 4373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406280411245152