Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq10 277 2e-69 >seq10 Length=920654 Score = 277 bits (306), Expect = 2e-69 Identities = 488/705 (69%), Gaps = 21/705 (3%) Strand=Plus/Minus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| |||||| | ||||||||||||| ||| || |||||||| || ||| ||| Sbjct 782127 CAGCTGCTCCTTCAGCGCCTCCACGTGGTTGCTGTACACATGCGCGTCACCGAGGGTGTG 782068 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 | || || || || || || || | ||| | || ||||||| || ||| Sbjct 782067 CACGAGCTCGCCAGGACGCAGCCCGGTCGCCTTGGCAATCAGAATCGTCAGCAAGGCGTA 782008 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 || |||||||||||||| || || |||||||| | |||||||||||||||| ||| Sbjct 782007 CGACGCGATGTTGAAGGGCACGCCGAGACCCATGTCGCACGAGCGCTGGTACAGCATGCA 781948 Query 145851 GGAGAGCTCC-CCGCCCGC-----CACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904 ||| |||||| || | || |||||||||||||| |||||||||||||||||||| Sbjct 781947 GGACAGCTCCTTCGTCTGCGTGTTCACGTAGAACTGGCCGAGGAGGTGGCAGGGCGGCAG 781888 Query 145905 GGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGG 145964 ||||| | |||| | ||||||||| || |||| || || | | | | ||| Sbjct 781887 CGCCATCTTGTGCAGCGCGCACGGGTTCCACGCCGTGAAGAGCAGACGGCGGTCGTTGGG 781828 Query 145965 GTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTA 146021 |||| |||||| |||| | ||| || | ||| ||| |||||||||| || ||| Sbjct 781827 GTTCGTCTTGAGGGTCTCGACGATC--GT-CTTGATCTGATCCACGCCCTCGCCGTCGTA 781771 Query 146022 ATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGG 146081 || | | | || | |||| ||||||||||||| | ||||||||| ||||| || || Sbjct 781770 ATTCGCGTCGAAGCCTTTGTACTCGGCCCCGAAGTGGCGCCACTGGAAGCCGTACACCGG 781711 Query 146082 CCCCAGGTCCCCGGGCTCCCTGTGCCC---CAGCCCGGCCCGGGCGAGGAAGTCCCGGGA 146138 ||| |||||| |||| | | | | |||||| | | ||||||| || ||||| Sbjct 781710 CCCGAGGTCC---ATCTCCTTATTCTCCGTCAGCCCACGGCTGTCGAGGAACTCGCGGGA 781654 Query 146139 CCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCC 146198 |||||| |||||||||| | | | || | | | ||| | | || || || Sbjct 781653 GCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCTGCCAGCAGCTGCGCGTTTGTCTCGCC 781594 Query 146199 CCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAG 146258 | || |||||||| ||||||||| ||| || | ||||||||| | ||| || ||||| Sbjct 781593 ACGGAGGAACCAGATGAGCTCTTCGCAGACGCCACGCCAGAAGACGCGCTTCGTCGTCAG 781534 Query 146259 CAGGGGGAACTG---GCCCCGCAGGGAGTACTTGGCCTGGTCCCCGAAGACGGACAGGGT 146315 ||| || | ||| | ||||||| ||| | ||| | ||||||| | | ||| Sbjct 781533 CAGCGGCAGCTGGTTGTCCCGCAGCGAGAAGCGCATCTGCGCGCCGAAGAGGCTGATGGT 781474 Query 146316 GCCCACGCCCGTCCTGTCCCCCCTGCGCACCCCGTTCGCCAGGAT 146360 ||| ||||| || | |||| || | || |||| || || ||| Sbjct 781473 GCCGACGCCGGTGCGGTCCTCCTTCACCAGCCCGGTCTTCATGAT 781429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590073421810320