Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_002794.1 Length=195859 Score E Sequences producing significant alignments: (Bits) Value seq73 84.2 3e-11 seq16 84.2 3e-11 >seq73 Length=29217 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 94333 GTCGAGTAACACAGGTTGTGCGCCATGATGATGGACGGGTACAGACTGGCGAAGTCGAAC 94392 || ||||| ||||||||||| || ||||||||||||||||| || ||||||||| | | Sbjct 2165 GTGGAGTAGCACAGGTTGTGGGCGATGATGATGGACGGGTAAAGCGAGGCGAAGTCCAGC 2224 Query 94393 ACGGCCACGGGCGCGTGGTGATAGCCCACCGTGGGCTCGAACACGGTGGCGCCCTGGTA 94451 || ||||| || || | ||||| |||| |||| ||||||||||| | ||| Sbjct 2225 GTCGCGACGGGACAGTTGTAAAAGCCCTTGATGGGATCGATGACGGTGGCGCCTTCGTA 2283 >seq16 Length=1411685 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 94333 GTCGAGTAACACAGGTTGTGCGCCATGATGATGGACGGGTACAGACTGGCGAAGTCGAAC 94392 || ||||| ||||||||||| || ||||||||||||||||| || ||||||||| | | Sbjct 389292 GTGGAGTAGCACAGGTTGTGGGCGATGATGATGGACGGGTAAAGCGAGGCGAAGTCCAGC 389351 Query 94393 ACGGCCACGGGCGCGTGGTGATAGCCCACCGTGGGCTCGAACACGGTGGCGCCCTGGTA 94451 || ||||| || || | ||||| |||| |||| ||||||||||| | ||| Sbjct 389352 GTCGCGACGGGACAGTTGTAAAAGCCCTTGATGGGATCGATGACGGTGGCGCCTTCGTA 389410 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 626617212595920