Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq10 152 4e-32 >seq10 Length=920654 Score = 152 bits (168), Expect = 4e-32 Identities = 311/454 (69%), Gaps = 16/454 (4%) Strand=Plus/Minus Query 20889 GGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACGTGGTTGTTGTAA 20948 || || | |||||| || | ||||||| | ||| | || ||||||||| |||| Sbjct 782150 GGGAAGGCACGCGGCACCCGCTGCAGCTGCTCCTTCAGCGCCTCCACGTGGTTGCTGTAC 782091 Query 20949 ACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCG 21008 || || |||||||| | ||||||||| | || || || ||| || || | | || Sbjct 782090 ACATGCGCGTCACCGAGGGTGTGCACGAGCTCGCCAGGACGCAGCCCGGTCGCCTTGGCA 782031 Query 21009 ATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCG 21068 |||||| |||||| | |||||| |||||||| || || || ||||| ||||||||| Sbjct 782030 ATCAGAATCGTCAGCAAGGCGTACGACGCGATGTTGAAGGGCACGCCGAGACCCATGTCG 781971 Query 21069 GCGGACCTCTGGTACAGCTGGCAGGACAGCTCC-----CCCCGAG-CCACGTAAAACTGA 21122 || | |||||||||| ||||||||||||| | || | |||||| ||||| Sbjct 781970 CACGAGCGCTGGTACAGCATGCAGGACAGCTCCTTCGTCTGCGTGTTCACGTAGAACTGG 781911 Query 21123 CACAAAACGTGACAAGGAGGGAGAGCCATC-CGCGCGAGGTCCGCG---GGGTTCCACGC 21178 | | | ||| || || || || |||||| | || || |||| ||||||||||| Sbjct 781910 CCGAGGAGGTGGCAGGGCGGCAGCGCCATCTTGTGC-AG---CGCGCACGGGTTCCACGC 781855 Query 21179 GCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCACCA-CGTAACGCA 21237 | | | || || |||| ||| | | || | || || | ||| | | Sbjct 781854 CGTGAAGAGCAGACGGCGGTCGTTGGGGTTCGTCTTGAGGGTCTCGACGATCGTCTTG-A 781796 Query 21238 GCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAAT 21297 ||| ||||| |||| || ||||| || |||||| || ||||||| ||||| || | Sbjct 781795 TCTGATCCACGCCCTCGCCGTCGTAATTCGCGTCGAAGCCTTTGTACTCGGCCCCGAAGT 781736 Query 21298 GTCTCCACTGGAACCCGTACACCGGCCCCAGATC 21331 | | ||||||||| |||||||||||||| || || Sbjct 781735 GGCGCCACTGGAAGCCGTACACCGGCCCGAGGTC 781702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427773612207840