Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_003521.1 Length=241087 Score E Sequences producing significant alignments: (Bits) Value seq73 105 1e-17 seq16 105 1e-17 >seq73 Length=29217 Score = 105 bits (116), Expect = 1e-17 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 77365 AGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAGAGGCTGGCGAAGTCG 77424 |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||| Sbjct 2162 AGGGTGGAGTAGCACAGGTTGTGGGCGATGATGATGGACGGGTAAAGCGAGGCGAAGTCC 2221 Query 77425 AAGACCGCCACGGGGTCGTTGTAGTAGCCCACCACGGGCTCGAAGACGGTGGCACCCTGG 77484 | ||| ||||| |||||| ||||| | ||| |||| ||||||||| || | | Sbjct 2222 AGCGTCGCGACGGGACAGTTGTAAAAGCCCTTGATGGGATCGATGACGGTGGCGCCTTCG 2281 Query 77485 TAG 77487 ||| Sbjct 2282 TAG 2284 >seq16 Length=1411685 Score = 105 bits (116), Expect = 1e-17 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 77365 AGGGTGGAGTAGCACAGGTTGTGGGCCATGATGATGGAGGGGTAGAGGCTGGCGAAGTCG 77424 |||||||||||||||||||||||||| ||||||||||| ||||| || ||||||||| Sbjct 389289 AGGGTGGAGTAGCACAGGTTGTGGGCGATGATGATGGACGGGTAAAGCGAGGCGAAGTCC 389348 Query 77425 AAGACCGCCACGGGGTCGTTGTAGTAGCCCACCACGGGCTCGAAGACGGTGGCACCCTGG 77484 | ||| ||||| |||||| ||||| | ||| |||| ||||||||| || | | Sbjct 389349 AGCGTCGCGACGGGACAGTTGTAAAAGCCCTTGATGGGATCGATGACGGTGGCGCCTTCG 389408 Query 77485 TAG 77487 ||| Sbjct 389409 TAG 389411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 771345984018960