Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq14 87.8 2e-12 >seq14 Length=1309914 Score = 87.8 bits (96), Expect = 2e-12 Identities = 240/360 (67%), Gaps = 6/360 (2%) Strand=Plus/Plus Query 50500 ATGCCCGGCCTCACGTTTAGCAACGAGTTGATTTCGCGCGACGAAGGAATGCACACAGAC 50559 ||||| || || || || ||||||||| |||| ||||||||||| || ||||||| ||| Sbjct 798050 ATGCCGGGGCTGACCTTCAGCAACGAGCTGATCTCGCGCGACGAGGGCCTGCACACGGAC 798109 Query 50560 TTTGCGTGTTTGTACTACAATACGCGCGTAAATGAAAAATTATCATACGAAACAATTTTG 50619 || ||||| || ||||| ||| | | || | || | || ||| | || Sbjct 798110 TTCGCGTGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGTCGCGCGAGCGCGTGCTG 798169 Query 50620 GACATGTTCAAAGAAGCCGTCGACATCGAAAAAGAGTTTTTCACGGACGCTTTACCCGTG 50679 || || || || || || ||||||| |||||| || ||||| | || ||| Sbjct 798170 GAGATCATCGTGGACGCGGTGAACATCGAGCGCGAGTTTATCTGCGACGCGCTGCCGGTG 798229 Query 50680 GCATTGTTGGGCATGAACGCAGACATGATGTGCG-AGTACATTGAGTTTGTTGCAGACAG 50738 || | ||||||||| | || ||||| ||| ||||||| ||||| || || ||| | Sbjct 798230 CGGCTGATTGGCATGAACTCCGAGCTGATG-GCGCAGTACATCGAGTTCGTGGCGGACCG 798288 Query 50739 ATTGTTGTTGCAGCTGGGACAACCGAAATACTATAATG-CACGTAACCCCTTTCCGTTTA 50797 || | || |||||| ||| |||| || | ||| | ||||| || | Sbjct 798289 CCTGCTTGTGTCGCTGGGGTTGGAGAAGCACTACAACGTGACG-CAGCCCTTCGACTTCA 798347 Query 50798 TGAATAACATATCGTTGGAGGGCAAAACAAACTTTTTCGA-AAGACGTGTAGGCGAATAC 50856 || | | || ||| || ||||||| || ||||| || || |||| | || ||||| ||| Sbjct 798348 TGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTTGAGAAGAAG-GTGGGCGAGTAC 798406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507011497342560