Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq21 98.7 2e-15 >seq21 Length=2191012 Score = 98.7 bits (108), Expect = 2e-15 Identities = 154/219 (70%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || || || | || || || ||||| || || ||||| | || || | || || Sbjct 978813 AAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTC 978872 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || || || || |||||||| || || | ||| || || || || || || || || || Sbjct 978873 CTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTC 978932 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| || || || || || | || ||||| | || ||||| || | || || Sbjct 978933 CTGGATCTTCGCCTTCACGTTCTCGATCGTGTCGCTGGCCTCCACCTCCAGCGCGATGGT 978992 Query 104527 CTTACCAGTAAGTGTTTTTAC-AAATATCTGCATTTTGT 104564 ||| || || || || || || ||| ||||||||||||| Sbjct 978993 CTTGCCGGTCAGCGTCTTCACGAAAGATCTGCATTTTGT 979031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151391643450264