Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_007646.1 Length=135135 Score E Sequences producing significant alignments: (Bits) Value seq73 86.0 5e-12 seq16 86.0 5e-12 >seq73 Length=29217 Score = 86.0 bits (94), Expect = 5e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 22506 CGGCTACCAGGGCGCCACTGTGATTAACCCCATCTCCGGCTTCTACAACACCCCCGTCCT 22565 ||||||| | |||||||| || || | |||||| ||||| |||||| |||||| Sbjct 2287 CGGCTACGAAGGCGCCACCGTCATCGATCCCATCAAGGGCTTTTACAACTGTCCCGTCGC 2228 Query 22566 GGTGGTGGACTTCGCTAGCCTGTACCCGAGCATTATCCAGGCCCACAACCTATGCTACTC 22625 | | |||||||||| || |||||| ||| ||| ||||||||||| |||||||| Sbjct 2227 GACGCTGGACTTCGCCTCGCTTTACCCGTCCATCATCATCGCCCACAACCTGTGCTACTC 2168 Query 22626 CACCATT 22632 |||| || Sbjct 2167 CACCCTT 2161 >seq16 Length=1411685 Score = 86.0 bits (94), Expect = 5e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 22506 CGGCTACCAGGGCGCCACTGTGATTAACCCCATCTCCGGCTTCTACAACACCCCCGTCCT 22565 ||||||| | |||||||| || || | |||||| ||||| |||||| |||||| Sbjct 389414 CGGCTACGAAGGCGCCACCGTCATCGATCCCATCAAGGGCTTTTACAACTGTCCCGTCGC 389355 Query 22566 GGTGGTGGACTTCGCTAGCCTGTACCCGAGCATTATCCAGGCCCACAACCTATGCTACTC 22625 | | |||||||||| || |||||| ||| ||| ||||||||||| |||||||| Sbjct 389354 GACGCTGGACTTCGCCTCGCTTTACCCGTCCATCATCATCGCCCACAACCTGTGCTACTC 389295 Query 22626 CACCATT 22632 |||| || Sbjct 389294 CACCCTT 389288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432304786915248