Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq24 477 2e-129 seq14 307 2e-78 seq92 298 1e-75 seq17 295 1e-74 >seq24 Length=2960390 Score = 477 bits (528), Expect = 2e-129 Identities = 1170/1747 (67%), Gaps = 59/1747 (3%) Strand=Plus/Minus Query 243735 CCACGCTGAACTGGACGGGTGCGACGGCGGCCTTGGTCCTCAGGTAGTACATGCCGGTCT 243794 ||||| |||||| || || || | ||||||||||| | ||||||||||| || |||| Sbjct 300900 CCACGGTGAACTTGATGGCGTCGGCAGCGGCCTTGGTGCGCAGGTAGTACACACCAGTCT 300841 Query 243795 TGAGTCCACTGGACCAGGCGTGGAGGTGCATGGCCGTCAGCTTCTTCATCTTGAGCTTTG 243854 |||| || | ||||| || || | |||| | ||| | || | | | ||| | Sbjct 300840 TGAGCCCGCACTCCCAGGTGTAGAAGAGCATCGACGTGATCTGCCCCGAC--GAG----G 300787 Query 243855 GGTCGTCCTCGCACAGAAAGAGGTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCCCGCT 243914 || ||| || ||||||||| || ||||| |||||| | | | | | || | Sbjct 300786 GG-----CTCTG-CAAAAAGAGGTTTAGCGACTGCGACTGGTCAATGTACTGGCCGCGAT 300733 Query 243915 CTGCGGCCATGGTGATGAGGTCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCT 243974 | |||||| ||| || | ||| | ||||| || | || ||| | || Sbjct 300732 CACGTGCCATGTCGATCAGCTTGCGCTGCGGGATCTCCCACACGGTGCGGTATAGCTCCT 300673 Query 243975 TGAGGTGCTCGGGGAACCCTTCGATGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGG 244034 | |||| || |||| | |||||| | | || || || |||| | ||||| || | Sbjct 300672 TCAGGTCATCAGGGATGCTGTCGATGGACAGAACGGACCCGTTGTAGGAGATGATCTCGT 300613 Query 244035 TGCGCATGTTATCGTTCCACAGGCCCAAGCGCTCCA---GCGCCTCGACCAGGTGCCTGT 244091 ||||||| | ||||||||||| || ||||| | | || || |||| | ||| Sbjct 300612 TGCGCATCGTCTCGTTCCACAGTCC---GCGCTTGATGAGGTCCATCACGAGGTACTTGT 300556 Query 244092 TCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCT 244151 ||||||| | ||||| || ||| || || || ||||| |||| | ||| |||| Sbjct 300555 TCACCACAGGGAACTCGCCGCTCAGGACACGACGGACGTAGATGTTGGAGGTGAAGGGCT 300496 Query 244152 CGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCA 244211 ||| || ||| |||||||||| ||||||| ||| || || ||||| |||| || || Sbjct 300495 CGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTCGAGGCGGTTGGCATCGGCGCCAGCA 300436 Query 244212 GCAGACTGTTCCTCACGCCG---TGCCTCTGGATGCGGAGTCTGAGCTCGTTCCAGTCCC 244268 |||| ||| | || |||| ||| || | | || | ||| || |||||||| Sbjct 300435 GCAGGGAGTTGCGCATGCCGACCTGCATCACCTT-CTCCTTCAG-GCT-GTCCCAGTCCC 300379 Query 244269 ACATGCCCGAGAG--GTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTT 244326 || ||||| | || |||||| ||||||||| ||||| || | |||| Sbjct 300378 ACC-GCCCGCTGTTCGGCCGCGCGTTCTT----CCACATGTCGAACTGGAGAATGCCCTC 300324 Query 244327 GCTGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCT 244386 ||| | |||||||||| | ||||| |||||| || || || || | || || | Sbjct 300323 GCTCGCCGGGCTGCCCTTGAAGGTCTCGTAGGGGCCTTCCTCCTTCGCTATCTC-CATCG 300265 Query 244387 -CTCGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCT 244445 | | |||| || ||| ||||||| |||||||| ||| | ||||| | | |||| Sbjct 300264 ACGCCTCGACCGCCGCGAAGTAGATCGTCTCGAAAATCTCCGAGTTCACCTTCTGCGCCT 300205 Query 244446 TGCCGCAGGTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGA 244505 | | | | |||||| | || | || |||||| ||||||||| ||||||||||||| Sbjct 300204 CGGCACTGACGAAGGGCAGGCGGAGCAGAATGAAGGCGTCGGCCAAACCCTGCACGCCGA 300145 Query 244506 TGCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCT-TCGGGCACGGGGTAAAAGTTG 244564 ||||| || | || ||| ||||| |||| || || | || ||||| ||||| Sbjct 300144 GGCCGACCGGGCGGTTGCGCATGTTGCTGCGCCGCGCCGTCTCG-ACCGGGTAGTAGTTG 300086 Query 244565 CCGTCGATCACCTTGTTGAGGTTGCGGGTGATCA--TGCG-GACGACGTCGGCCAGCAGC 244621 | || || || ||||||||||||||||||| | || |||| || | |||||| Sbjct 300085 CGATCAATGACACGGTTGAGGTTGCGGGTGATCTGCTTCGTGACGGTGTAG---AGCAGC 300029 Query 244622 TGAAAGTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCG 244681 || |||| ||||| | | ||| || || || | | ||| || || |||| Sbjct 300028 TGGTGGTCGAACTCGC---GCTTCTCCTCGTTGACGAAGCGCGGCAACGCGATGGAGGCG 299972 Query 244682 ACGCTGGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTG 244741 | ||||||| || ||| |||||||| ||| ||| ||| ||||||||| Sbjct 299971 A---------GGTTGCACACCGCCGTCTCCTCCGGCGACGTGAACTCGACGATCTCGGTG 299921 Query 244742 CAGAGGTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCG 244801 || ||||| ||||||||||||||| |||| || || || |||||| |||||| ||| Sbjct 299920 CACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGCG 299861 Query 244802 TCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAG 244861 ||||||||||| ||||||||| | || ||||||| ||| | |||||| | | ||| Sbjct 299860 TCCTTGTAGAGGATGAAGGGCACGCCTGTCTCGATCTGCGACTCGAGGATGGCGAACCAC 299801 Query 244862 AGGTCCCTAGCCTTGACCGTCCTGCGAGCC-TTGCCCTCTGCCTCGTAGCGGGTGTACAG 244920 | ||| |||| || || |||| ||| |||||| ||||||||||| ||| || Sbjct 299800 ACCTCCTGCGCCTGGAGGGT-CTGCACGCCGCGGCCCTCGGCCTCGTAGCGCTCGTAGAG 299742 Query 244921 GGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCCGGGCACATGAG 244980 | ||||||||| ||| || ||| || || ||||| | |||| ||| || Sbjct 299741 GCGCTCGAACTCTTCGCCGTAGCAGTCGCTGAGCCCCGGGCAGGTGCTCGGGTCCATCAG 299682 Query 244981 ACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTG 245040 |||||| || || ||| || | || |||||||||||| |||| ||| || || | Sbjct 299681 CGTCCACTTCCCCTCGCTCTTCACACGCTTCATGAAGAGGTCCGGGACCCACAGCGCGTA 299622 Query 245041 GAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTC 245100 ||||||||| | || | ||| || ||| ||| ||||| | ||||| || ||| | Sbjct 299621 GAAGAGGTCGCGGGCACGCTGGTCATCCTTGCCGGTGTTGCGCTTCAGCAGCAGGAAGCC 299562 Query 245101 AAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCC 245160 ||||| |||| ||||||| ||||| | ||||| |||| |||||| ||||| ||| Sbjct 299561 AAAGATGTCGGCGTGCCACGGCTCAAGGTAGATGGCGAAGGCGCCCTTGCGCTTACCGCC 299502 Query 245161 TCCCTGGTCCAC-CATCCTCTCGAGCGCGTTGAAGATGCGCAGGGTAGGCACTATGCCGT 245219 ||||||||||| | | || | |||||| | |||||| | ||||| | |||| Sbjct 299501 GCCCTGGTCCACGTAGCGGGCCGTG-TTGTTGAACACGCGCAGCATCGGCACCAACCCGT 299443 Query 245220 TAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACA 245279 | || ||||| ||||| ||||||| |||| | | | | |||| | | || Sbjct 299442 TCGACGTCCCGTTCGTGCCGGCGATGTAGCTGCCCGCGGCACGAATGTTGTGCACGTGCA 299383 Query 245280 TGCCTAGTCCGCCGGCGTGC-TTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATG 245338 ||| | || || || ||| ||| ||| | |||||| ||| | ||||| ||| Sbjct 299382 GGCCGATGCCACCAGC-TGCTTTGCTGATCACGGCGCACTCCTTCAGCGTGTCGTAGATG 299324 Query 245339 CCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGG 245398 || || ||||||||| |||| | || ||||| ||| || ||| ||||| || Sbjct 299323 CCGTCGATGCTGTCCTCCTTCGACGCCACGAGGAAGCACGAGCTCATCTGCGGCTTCGGC 299264 Query 245399 CTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAGTAGCGGCTCGAGAGGAACCCG 245458 ||| | |||||| || || || |||||||||| ||| ||| |||| | || | Sbjct 299263 GTGCCGGCGTTGAAGAGCGTCGGCGTGGCGTGGGTGAAGAAGCCCTTCGACATGAGGTTG 299204 Query 245459 TACGTCT 245465 ||||||| Sbjct 299203 TACGTCT 299197 >seq14 Length=1309914 Score = 307 bits (340), Expect = 2e-78 Identities = 595/868 (69%), Gaps = 15/868 (2%) Strand=Plus/Plus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| | |||| ||||||||| || ||||||| || | || || || |||||| Sbjct 797551 GATCATGTACCATGACATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGCT 797610 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 |||||||| || || | ||| |||| | | |||| | | ||| || ||| Sbjct 797611 GGAGGAGATCGATCTTGGCAACGACATGAAGGACTGGTTGGCGCTGAACGACGGCGAGCG 797670 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 | ||| |||| || | || ||||||||||||| | |||||||| || | ||||| Sbjct 797671 GCACTTCATCAAGCACGTGCTCGCCTTCTTCGCCGGCAGCGACGGCATCGTGATCGAGAA 797730 Query 42464 CCTGGC-CACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGC 42521 ||| || || | | ||||||| || ||| || |||||||| ||| |||||||| Sbjct 797731 CCTCGCTCAGC-GCTTCATGAGCGACGTGAAGGTGCCGGAGGCGCG-TGCGTTCTACGGA 797788 Query 42522 TTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTAC 42581 |||||| | || |||||| | ||||| ||| |||| | ||||| |||||||| Sbjct 797789 TTCCAGCTGATGATGGAGAACATCCACTCGGAGACGTACTCGGTGCTGCTGGACACGTAC 797848 Query 42582 ATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATC 42641 ||| ||| || ||| | ||| | | || || ||||||| || ||||| Sbjct 797849 ATCACGGACAGCGAGGAGAAGCTGCGTCTGCTGCACGCGATTCAGACGATCCCGTGCATT 797908 Query 42642 AAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAG 42701 |||||||||| || |||||| | ||||||| || ||| || | ||| ||| Sbjct 797909 CAGAAGAAGGCAGAGTGGGCGGTGCGATGGATCGGCAG---CGAGGCGAGCTTCCAGGAG 797965 Query 42702 AGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATC 42761 ||||| | | ||| | ||||||||||||||||||||||| || ||||| | | | Sbjct 797966 CGGCTGATCGGGTTTGCTGCCGTCGAGGGCATCTTCTTCTCCGGGTCCTTCTGCGCGCTG 798025 Query 42762 TTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGC 42821 |||||||| ||| || | | |||||| || || |||||| ||||| || ||| Sbjct 798026 TTCTGGCTGAAGAAGCGTGGGCTGATGCCGGGGCTGACCTTCAGCAACGAGCTGATCTCG 798085 Query 42822 AGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGT---TCTCGAGCCACCTCAGG 42878 | |||||||| ||||| | |||||| || ||||| |||| |||| ||| ||| | Sbjct 798086 CGCGACGAGGGCCTGCACACGGACTTCGCGTGCCTGCTGTACAACTCG---CACATCAAG 798142 Query 42879 CACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 ||||||| ||| ||||| || | || |||||| ||| || ||| | |||||| Sbjct 798143 CACAAGCTGTCGCGCGAGCGCGTGCTGGAGATCATCGTGGACGCGGTGAACATCGAGCGC 798202 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGC 42998 ||||| || | ||||||| ||| ||| | ||||||||| ||| || ||| Sbjct 798203 GAGTTTATCTGCGACGCGCTGCCGGTGCGGCTGATTGGCATGAACTCCGAGCTGATGGCG 798262 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCT-CCTGTGCCAGATGGGTCTCAGCCGCCTCTA 43057 |||||||| ||| ||| || |||| || | |||| | |||| || | | ||| Sbjct 798263 CAGTACATCGAGTTCGTGGCGGACCGCCTGCTTGTGTCGCTGGGGTTGGAGAAG-CACTA 798321 Query 43058 CAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTT 43117 |||| | || ||||||||||| ||||||| |||||| || |||||||||| ||||| Sbjct 798322 CAACGTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTT 798381 Query 43118 TTTCGAGAAGCGCGTCGCCGACTACCAG 43145 || |||||| || | ||| |||||| Sbjct 798382 CTTTGAGAAGAAGGTGGGCGAGTACCAG 798409 >seq92 Length=13896 Score = 298 bits (330), Expect = 1e-75 Identities = 595/869 (68%), Gaps = 17/869 (2%) Strand=Plus/Minus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| | ||| ||||||||| || ||||||| || | || || || |||||| Sbjct 3733 GATCATGTACCCTGACATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGCT 3674 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 |||||||| ||||| | ||| |||| | | ||||| | ||| || ||| Sbjct 3673 GGAGGAGATCGACCTTGGCAACGACATGAAGGACTGGGTGAGGCTGAACGACGGCGAGCG 3614 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 | ||| |||| || | || ||||||||||||| | |||||||| || | ||||| Sbjct 3613 GCACTTCATCAAGCACGTGCTCGCCTTCTTCGCCGGCAGCGACGGCATCGTGATCGAGAA 3554 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCA-GTACTTTGAGGCGCGCTGC-TTCTACGGC 42521 ||| || | ||||||| || ||| | || | |||||||| ||| || |||||| Sbjct 3553 CCTTGCAGAGCGCTTCATGAGCGACGTGAAAGTGCCG-GAGGCGCG-TGCGTTTTACGGC 3496 Query 42522 TTCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTAC 42581 |||||| | || |||||| | ||||| ||| |||| | ||||| |||||||| Sbjct 3495 TTCCAGCTGATGATGGAGAACATCCACTCGGAGACGTACTCGGTGCTGCTGGACACGTAC 3436 Query 42582 ATCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATC 42641 ||| ||| || ||| | | ||| | | || || ||||||| || ||||| Sbjct 3435 ATCACGGACAGCGAGGAGAAGATGCGTCTGCTGCACGCGATCCAGACGATCCCGTGCATT 3376 Query 42642 AAGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAG 42701 |||||||||| || |||||| | ||||||| || ||| || | ||| ||| Sbjct 3375 CAGAAGAAGGCAGAGTGGGCGGTGCGTTGGATCGGCAG---CGAGGCGAGCTTCCAGGAG 3319 Query 42702 AGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATC 42761 ||||| | | ||| | ||||||||||||||||||||||| || ||||| | | | Sbjct 3318 CGGCTGATCGGGTTTGCTGCCGTCGAGGGCATCTTCTTCTCCGGGTCCTTCTGCGCGCTG 3259 Query 42762 TTCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGC 42821 |||||||| ||| || | | |||||| || || |||||| ||||| || ||| Sbjct 3258 TTCTGGCTGAAGAAGCGCGGGCTGATGCCGGGGCTGACCTTCAGCAACGAGCTGATCTCG 3199 Query 42822 AGGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC---TCGAGCCACCTCAGG 42878 | |||||||| ||||| | |||||| || ||||| |||| | ||| ||| ||| | Sbjct 3198 CGCGACGAGGGCCTGCACACGGACTTCGCGTGCCTGCTGTACAACTCG---CACATCAAG 3142 Query 42879 CACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAG 42938 ||||||| ||| ||||| || | || ||||| ||| || ||| | |||||| Sbjct 3141 CACAAGCTGTCGCGCGAGCGCGTGCTGGAGATCATTCTGGACGCGGTGAACATCGAGCGC 3082 Query 42939 GAGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGC 42998 |||||| || | || |||| ||| ||| ||||||||||| ||| || ||| Sbjct 3081 GAGTTCATCTGCGACGCGTTGCCGGTGCGGCTGATCGGCATGAACGCCGAGCTGATGGCG 3022 Query 42999 AAGTACATCCAGTACGTCGCCGACCATCT-CCTGTGCCAGATGGGTCT-CAGCCGCCTCT 43056 ||||||| ||| ||| || |||| || | |||| | | | ||| | || | | || Sbjct 3021 CAGTACATTGAGTTCGTGGCGGACCGCCTGCTTGTGTC-GCTCGGTTTGGAGAAG-CACT 2964 Query 43057 ACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACT 43116 ||||| | || ||||||||||| ||||||| |||||| | |||||||||| |||| Sbjct 2963 ACAACGTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGACGAACT 2904 Query 43117 TTTTCGAGAAGCGCGTCGCCGACTACCAG 43145 | ||||||||| || | ||| || ||| Sbjct 2903 TCTTCGAGAAGAAGGTGGGCGAGTATCAG 2875 >seq17 Length=1449266 Score = 295 bits (326), Expect = 1e-74 Identities = 590/867 (68%), Gaps = 13/867 (1%) Strand=Plus/Minus Query 42284 GATCGAGCACCAGGACATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGC 42343 |||| | ||| ||||||||| || ||||||| || | || || || |||||| Sbjct 520937 GATCATGTACCCTGACATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGCT 520878 Query 42344 CGAGGAGATTGACCTGGCCAAGGACACGGCCGGCTGGGAGTCACTGTCTGAGAACGAAAA 42403 |||||||| ||||| | ||| |||| | | ||||| | ||| || ||| Sbjct 520877 GGAGGAGATCGACCTTGGCAACGACATGAAGGACTGGGTGAGGCTGAACGACGGCGAGCG 520818 Query 42404 GTTTTTCCTCAAAAACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAA 42463 | ||| |||| || | || ||||||||||||| | |||||||| || | ||||| Sbjct 520817 GCACTTCATCAAGCACGTGCTCGCCTTCTTCGCCGGCAGCGACGGCATCGTGATCGAGAA 520758 Query 42464 CCTGGCCACCAGGTTCATGAAAGAGGTGCAGTACTTTGAGGCGCGCTGC-TTCTACGGCT 42522 ||| || | ||||||| || ||| || |||||||| ||| || ||||||| Sbjct 520757 CCTTGCAGAGCGCTTCATGAGCGACGTGAAGGTGCCGGAGGCGCG-TGCGTTTTACGGCT 520699 Query 42523 TCCAGATAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACA 42582 ||||| | || |||||| | ||||| ||| |||| | ||||| ||||||||| Sbjct 520698 TCCAGCTCATGATGGAGAACATCCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACA 520639 Query 42583 TCCTGGATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCA 42642 || ||| || ||| | || || | | || || |||| || || ||||| Sbjct 520638 TCACGGACAGCGAGGAGAAGATGCGGTTGCTGCACGCGATCCAGACAATCCCGTGCATTC 520579 Query 42643 AGAAGAAGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGA 42702 |||||||||| || |||||| | ||||||| || ||| || | ||| ||| Sbjct 520578 AGAAGAAGGCAGAGTGGGCGGTGCGTTGGATCGGCAG---CGAGGCGAGCTTCCAGGAGC 520522 Query 42703 GGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCT 42762 | ||| | | || | ||||||||||||||||||||||| || ||||| | | | | Sbjct 520521 GCCTGATCGGGTTCGCTGCCGTCGAGGGCATCTTCTTCTCCGGGTCCTTCTGCGCGCTGT 520462 Query 42763 TCTGGCTCAAGCAGAAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA 42822 ||||||| ||| || | | |||||| || || |||||| ||||| || ||| Sbjct 520461 TCTGGCTGAAGAAGCGCGGGCTGATGCCGGGGCTGACCTTCAGCAACGAGCTGATCTCGC 520402 Query 42823 GGGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTC---TCGAGCCACCTCAGGC 42879 | |||||||| ||||| | |||||| || ||||| |||| | ||| ||| ||| || Sbjct 520401 GCGACGAGGGCCTGCACACGGACTTCGCGTGCCTGCTGTACAACTCG---CACATCAAGC 520345 Query 42880 ACAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGG 42939 |||||| ||| ||||| || | || ||||| ||| || ||| | |||||| | Sbjct 520344 ACAAGCTGTCGCGCGAGCGCGTGCTGGAGATCATTCTGGACGCGGTGAACATCGAGCGCG 520285 Query 42940 AGTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCA 42999 ||||| || | || |||| ||| ||| ||||||||||| ||| || ||| Sbjct 520284 AGTTCATCTGCGACGCGTTGCCGGTGCGGCTGATCGGCATGAACGCCGAGCTGATGGCGC 520225 Query 43000 AGTACATCCAGTACGTCGCCGACCATCT-CCTGTGCCAGATGGGTCTCAGCCGCCTCTAC 43058 |||||||| ||| ||| || |||| || | |||| | | | ||| | | |||| Sbjct 520224 AGTACATCGAGTTCGTGGCGGACCGCCTGCTTGTGTC-GCTCGGTTTGGAGAAACACTAC 520166 Query 43059 AACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTT 43118 ||| | || ||||||||||| ||||||| |||||| || |||||||||| ||||| Sbjct 520165 AACGTGACGCAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACAAACTTC 520106 Query 43119 TTCGAGAAGCGCGTCGCCGACTACCAG 43145 ||||||||| || | ||| |||||| Sbjct 520105 TTCGAGAAGAAGGTGGGCGAGTACCAG 520079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944333793658080