Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq331 95.1 1e-14 seq26 95.1 1e-14 seq21 93.3 3e-14 seq20 91.5 1e-13 >seq331 Length=20977 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| |||||||| || || |||||| ||||||||| |||||||| || || Sbjct 8071 CCACCGCGCAGGCGCAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 8130 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || |||| |||||||||||||| |||||||||||||| ||| || Sbjct 8131 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 8190 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 8191 ATGCCCTCCTTGTCC 8205 >seq26 Length=613868 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| |||||||| || || |||||| ||||||||| |||||||| || || Sbjct 365958 CCACCGCGCAGGCGCAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 366017 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || |||| |||||||||||||| |||||||||||||| ||| || Sbjct 366018 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 366077 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 366078 ATGCCCTCCTTGTCC 366092 >seq21 Length=2191012 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || || |||||| ||||||||| |||||||| || || Sbjct 977202 ACCGCCGCGCAGGCGAAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 977261 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || |||| |||||||||||||| |||||||||||||| ||| || Sbjct 977262 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGG 977321 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 977322 AATGCCCTCCTTGTCC 977337 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || || |||||| ||||||||| |||||||| || || Sbjct 977430 ACCGCCGCGCAGGCGAAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 977489 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || |||| |||||||||||||| |||||||||||||| ||| || Sbjct 977490 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGG 977549 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 977550 AATGCCCTCCTTGTCC 977565 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || || |||||| ||||||||| |||||||| || || Sbjct 977658 ACCGCCGCGCAGGCGAAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 977717 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || |||| |||||||||||||| |||||||||||||| ||| || Sbjct 977718 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGG 977777 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 977778 AATGCCCTCCTTGTCC 977793 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || || |||||| ||||||||| |||||||| || || Sbjct 977886 ACCGCCGCGCAGGCGAAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 977945 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || |||| |||||||||||||| |||||||||||||| ||| || Sbjct 977946 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGG 978005 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 978006 AATGCCCTCCTTGTCC 978021 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || || |||||| ||||||||| |||||||| || || Sbjct 978114 ACCGCCGCGCAGGCGAAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 978173 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || |||| |||||||||||||| |||||||||||||| ||| || Sbjct 978174 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGG 978233 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 978234 AATGCCCTCCTTGTCC 978249 Score = 93.3 bits (102), Expect = 3e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || || |||||| ||||||||| |||||||| || || Sbjct 978342 ACCGCCGCGCAGGCGAAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 978401 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || |||| |||||||||||||| |||||||||||||| ||| || Sbjct 978402 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGG 978461 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 978462 AATGCCCTCCTTGTCC 978477 Score = 89.7 bits (98), Expect = 4e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 33899 AACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTG 33958 |||| || | ||| || ||||| || || |||||| ||||||||| |||||||| || | Sbjct 976973 AACCGCCGCGCAGGCGAAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCG 977032 Query 33959 CCAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 | | || | || |||| |||||||| ||||| |||||||||||||| ||| | Sbjct 977033 CGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGG 977092 Query 34019 GCACGCTCTCTTTGTCC 34035 | | || ||| |||||| Sbjct 977093 GAATGCCCTCCTTGTCC 977109 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || || |||||| ||||||||| |||||||| || || Sbjct 978570 ACCGCCGCGCAGGCGAAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 978629 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || |||| |||||||| ||||| |||||||||||||| ||| || Sbjct 978630 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGG 978689 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 978690 AATGCCCTCCTTGTCC 978705 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| || | ||| || ||||| || || |||||| ||||||||| |||||||| || || Sbjct 978798 ACCGCCGCGCAGGCGAAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGC 978857 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 | || | || |||| |||||||| ||||| |||||||||||||| ||| || Sbjct 978858 GAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGG 978917 Query 34020 CACGCTCTCTTTGTCC 34035 | || ||| |||||| Sbjct 978918 AATGCCCTCCTTGTCC 978933 >seq20 Length=1996037 Score = 91.5 bits (100), Expect = 1e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || | ||| |||||||| || || |||||| ||||||||| |||||||| || || Sbjct 1271119 CCACCGCGCAGGCGCAGCACGAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCG 1271178 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGGC 34020 | || | || |||| |||||||||||||| |||||||||||||| ||| || Sbjct 1271179 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGA 1271238 Query 34021 ACGCTCTCTTTGTCC 34035 | || ||| || ||| Sbjct 1271239 ATGCCCTCCTTATCC 1271253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397060183647316