Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq24 288 1e-72 seq22 192 7e-44 seq328 149 8e-31 seq283 140 4e-28 seq19 91.5 2e-13 >seq24 Length=2960390 Score = 288 bits (318), Expect = 1e-72 Identities = 842/1291 (65%), Gaps = 17/1291 (1%) Strand=Plus/Plus Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| |||||||| || ||||| | || |||||||| || | | || | || || Sbjct 1115801 CGTCGAGAAGATCTGGCTCTTCTTGGTCGGGATCGTCGTGTTGCGCTTGATCAGCGCCGT 1115860 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | || || || || | || || | ||| || |||||||||| || | ||| Sbjct 1115861 CATCACGCCGCCGGCCGTCTCAATGCCCAGCGTCAGCGGCGTCACGTCCAGCAGCAGCAG 1115920 Query 6988 GTCTTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | | | | | | | | ||| | ||||| | |||| || || |||| ||| ||| Sbjct 1115921 GCCCTC--CGTCTGCTTGCTCTTGCCGCCCGTCAGGATGAACGCCTGCACCGCCGCGCCG 1115978 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || || ||||| |||||||| || | || ||||| || || ||| ||| | || Sbjct 1115979 TACGCCACAGCCTCGTCGGGGTTGATGCTCTTGTTCAGCTCCTTGCCGCCAAAGAAGTCG 1116038 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | || || | |||||||| || || || || || |||| |||| || | | Sbjct 1116039 GACACCAGGCTCTGCACCTTCGGGATGCGCGTGGACCCGCCCACCAGCACGACGTCGTGC 1116098 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || || ||||| | ||| | || || || || | || | Sbjct 1116099 ACGGAGCGCTTGTCCATCTTCGCGTCCTGCAGCACGCGCTCCACCGGCTGGATCGTGCTG 1116158 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| ||| ||||| ||||| || || || || || || | | | ||| || Sbjct 1116159 CGGAACAGGTCGCCGCACAGCTCCTCGAAGCGCGCGCGCGTGATCGTGGCCTGGAAGTCC 1116218 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 ||| |||| | | || || || || || || | || | || | || | ||| ||| Sbjct 1116219 ACGTTGTCGAACAGCGCGTCGATCTCGATCGTCGCCTGCGTCGCGGCGGACAGCGTGCGC 1116278 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || |||||||| ||||| || || | || || || || || || | || | || Sbjct 1116279 TTGGCGCGCTCGCACGCGGTGCGCAGGCGGCGCAGCGCGCGGTGGCTCGACGACAGGTCC 1116338 Query 7406 TT---CTTATGTTTACGTTTAAACTCTTCAGAGAAGT--GTCGAAGGAGTCTCGAATCGA 7460 || ||| | || || || ||||| || | |||| ||| | || | |||| Sbjct 1116339 TTGCCCTTGTTCTTGCGCTTGAACTCCTCGGTGAAGAAGGTC--ACCAGGCGGTTGTCGA 1116396 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 | || || || || | ||| || || || ||||| || || || ||||| || || | Sbjct 1116397 AGTCCTCGCCGCCGAGGTGGGTGTCGCCGTTCGTCGCCTTCACCTCGAAGATGCCGCCGT 1116456 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 | || | | || || ||||| |||||||| || || ||||| || || || ||||| Sbjct 1116457 CGATCGTCAGCAGCGTCACATCGAACGTACCGCCGCCAAGGTCGAAGATCAGCACGTTGC 1116516 Query 7581 TATCGT---CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 || | |||| | | ||| || || ||||||||||| ||||| ||||| || || | Sbjct 1116517 GCTCCTTGCCGTCGTCGCCCTTGTCCAGCCCGTACGCGATGGCCGCAGCCGTCGGCTCGT 1116576 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || || || || | |||||| ||||| || | || || |||||||| || || | Sbjct 1116577 TGATGATGCGCAGCACCTCCAGGCCCGCAATCGTGCCGGCGTCCTTCGTCGCCTGGCGCT 1116636 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 |||| ||||| |||||||| || ||||| || || || | | | || | ||| || || | Sbjct 1116637 GCGAGTCGTTGAAGTAGGCAGGCACCGTCACCACGGCCTTCTTCACCTGCTTGCCAAGGT 1116696 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 ||| || || | || ||||| || || |||||||| | ||| || | || | Sbjct 1116697 ACGCCTCGGCCGTCTCCTTCATCTTCAGCAGCACCATCGAACTCACCTCCTCCGGCGTGA 1116756 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | ||| || |||| || | || |||| ||| || || || | | Sbjct 1116757 AGGTCTTCTCCTCGCCGTGGAACTGCACCGTGATCACGGGCTTGTCGTCACCCTTCGTCG 1116816 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | ||||| | | ||| | ||||| || | || || ||| ||||| | | Sbjct 1116817 TCACCTTGAAGGGCCAGTGCTTCATGTCCGCCTGCACAACGGAGTCGTTGAACTTGCGGC 1116876 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 | || || ||||| || || || || ||||| | |||||||| || |||||||||| Sbjct 1116877 CAATCAGGCGCTTCGCGTCGAACACCGTGTTGTGCGGGTTCATCGCCACCTGGTTCTTCG 1116936 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || || ||||| ||||| || ||||| || ||||||||||| || ||||| | Sbjct 1116937 CGGCATCGCCGATCAGACGCTC---CGAGTCCGTGAAGGCGACGTACGACGGCGTCGTGC 1116993 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || || ||||||||||| || || || ||||| ||||| ||||| ||||| ||||||| Sbjct 1116994 GGTTGCCCTGGTCGTTCGCGATGATCTCCACGCGCTCGTTCTGCCACACGCCCACGCACG 1117053 Query 8118 AATACGTTGTTCCTAAATCAATACCGATTGC 8148 | ||||| || || | |||||||| || || Sbjct 1117054 AGTACGTCGTGCCCAGGTCAATACCAATAGC 1117084 Score = 284 bits (314), Expect = 2e-71 Identities = 841/1291 (65%), Gaps = 17/1291 (1%) Strand=Plus/Plus Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 ||| |||||||| || ||||| | || |||||||| || | | || | || || Sbjct 1120445 CGTCGAGAAGATCTGGCTCTTCTTGGTCGGGATCGTCGTGTTGCGCTTGATCAGCGCCGT 1120504 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | || || || || | || || | ||| || |||||||||| || | ||| Sbjct 1120505 CATCACGCCGCCGGCCGTCTCAATGCCCAGCGTCAGCGGCGTCACGTCCAGCAGCAGCAG 1120564 Query 6988 GTCTTGAACAGATTCGTTCCCTT--CACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCG 7045 | | | | | | | | ||| | ||||| | |||| || || |||| ||| ||| Sbjct 1120565 GCCCTC--CGTCTGCTTGCTCTTGCCGCCCGTCAGGATGAACGCCTGCACCGCCGCGCCG 1120622 Query 7046 TATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCC 7105 || || |||||||| |||||||| || | || ||||| || || ||| || | || Sbjct 1120623 TACGCCACCGCCTCGTCGGGGTTGATGCTCTTGTTCAGCTCCTTGCCGCCGAAGAAGTCG 1120682 Query 7106 GATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTC 7165 || | || || | |||||||| || || || || || |||| |||| || | | Sbjct 1120683 GACACCAGGCTCTGCACCTTCGGGATGCGCGTGGACCCGCCCACCAGCACGACGTCGTGC 1120742 Query 7166 ACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTA 7225 || || || ||||| | ||| | || || || || | || | Sbjct 1120743 ACGGAGCGCTTGTCCATCTTCGCGTCCTGCAGCACGCGCTCCACCGGCTGGATCGTGCTG 1120802 Query 7226 CGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCA 7285 ||||||| ||| ||||| ||||| || || || || || || | | | ||| || Sbjct 1120803 CGGAACAGGTCGCCGCACAGCTCCTCGAAGCGCGCGCGCGTGATCGTGGCCTGGAAGTCC 1120862 Query 7286 ACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGC 7345 ||| |||| | | || || || || || || | || | || | || | ||| ||| Sbjct 1120863 ACGTTGTCGAACAGCGCGTCGATCTCGATCGTCGCCTGCGTCGCGGCGGACAGCGTGCGC 1120922 Query 7346 TTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || |||||||| ||||| || || | || || || || || || | || | || Sbjct 1120923 TTGGCGCGCTCGCACGCGGTGCGCAGGCGGCGCAGCGCGCGGTGGCTCGACGACAGGTCC 1120982 Query 7406 TT---CTTATGTTTACGTTTAAACTCTTCAGAGAAGT--GTCGAAGGAGTCTCGAATCGA 7460 || ||| | || || || ||||| || | |||| ||| | || | |||| Sbjct 1120983 TTGCCCTTGTTCTTGCGCTTGAACTCCTCGGTGAAGAAGGTC--ACCAGGCGGTTGTCGA 1121040 Query 7461 AATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTT 7520 | || || || || | ||| || || || ||||| || || || ||||| || || | Sbjct 1121041 AGTCCTCGCCGCCGAGGTGGGTGTCGCCGTTCGTCGCCTTCACCTCGAAGATGCCGCCGT 1121100 Query 7521 CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 | || | | || || ||||| |||||||| || || ||||| || || || ||||| Sbjct 1121101 CGATCGTCAGCAGCGTCACATCGAACGTACCGCCGCCAAGGTCGAAGATCAGCACGTTGC 1121160 Query 7581 TATCGT---CGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCAT 7637 || | |||| | | ||| || || ||||||||||| ||||| ||||| || || | Sbjct 1121161 GCTCCTTGCCGTCGTCGCCCTTGTCCAGCCCGTACGCGATGGCCGCAGCCGTCGGCTCGT 1121220 Query 7638 TAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTT 7697 | || || || || | |||||| ||||| || | || || |||||||| || || | Sbjct 1121221 TGATGATGCGCAGCACCTCCAGGCCCGCAATCGTGCCGGCGTCCTTCGTCGCCTGGCGCT 1121280 Query 7698 GCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGAT 7757 |||| ||||| |||||||| || ||||| || || || | | | || | ||| || || | Sbjct 1121281 GCGAGTCGTTGAAGTAGGCAGGCACCGTCACCACGGCCTTCTTCACCTGCTTGCCAAGGT 1121340 Query 7758 ACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAA 7817 ||| || || | || ||||| || || |||||||| | ||| || | || | Sbjct 1121341 ACGCCTCGGCCGTCTCCTTCATCTTCAGCAGCACCATCGAGCTCACCTCCTCCGGCGTGA 1121400 Query 7818 ACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGA 7877 | ||| || |||| || | || |||| ||| || || || | | Sbjct 1121401 AGGTCTTCTCCTCGCCGTGGAACTGCACCGTGATCACGGGCTTGTCGTCACCCTTCGTCG 1121460 Query 7878 TAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTC 7937 | ||||| | | ||| | ||||| || | || || ||| ||||| | | Sbjct 1121461 TCACCTTGAAGGGCCAGTGCTTCATGTCCGCCTGAACAACGGAGTCGTTGAACTTGCGGC 1121520 Query 7938 CGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCG 7997 | || || ||||| || || || || ||||| | |||||||| || |||||||||| Sbjct 1121521 CAATCAGGCGCTTCGCGTCGAACACCGTGTTGTGCGGGTTCATCGCCACCTGGTTCTTCG 1121580 Query 7998 CCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTC 8057 | || || ||||| ||||| || ||||| || ||||||||||| || ||||| | Sbjct 1121581 CGGCATCGCCGATCAGACGCTC---CGAGTCCGTGAAGGCGACGTACGACGGCGTCGTGC 1121637 Query 8058 GATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACG 8117 | || || ||||||||||| || || || ||||| ||||| ||||| ||||| ||||||| Sbjct 1121638 GGTTGCCCTGGTCGTTCGCGATGATCTCCACGCGCTCGTTCTGCCACACGCCCACGCACG 1121697 Query 8118 AATACGTTGTTCCTAAATCAATACCGATTGC 8148 | ||||| || || | ||||| || || || Sbjct 1121698 AGTACGTCGTGCCCAGGTCAATGCCAATAGC 1121728 Score = 140 bits (154), Expect = 4e-28 Identities = 237/341 (70%), Gaps = 8/341 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| ||| || |||| ||| Sbjct 472999 TCAAAGTCCTCACCACCGAGGTGGGTGTCGCCGTTCGTCGCGACGACCTCGAAGAAACCC 472940 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | || ||| ||||| |||||||||||||| |||||||| | ||| | | Sbjct 472939 TCGTCGATCGTCAGCAGCGACACATCGAACGTACCACCACCAAGGTCAAAGACGAGAATG 472880 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | | ||||| || ||||| ||||| || || || || || || Sbjct 472879 TTCTTCTCGCCCGCCTTGTT------AAGGCCGTAGGCGATGGCGGCGGCGGTCGGCTCG 472826 Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | ||| ||| || || || || | ||| || || || || || || Sbjct 472825 TTGATGATGCGCACGAC-GTTGAGACCGGCGATCTTGCCCGAGTCCTTGGTGGCCTGGCG 472767 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 |||| |||||| |||||||| || ||||| ||||| |||| | | || |||| ||||| Sbjct 472766 CTGCGCATCGTTGAAGTAGGCGGGCACCGTCACGACGGCGTTCTTCACCTTCTCGCCGAG 472707 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 | | | || | ||| || ||||| || || ||||||| Sbjct 472706 AAAGGTCTCGGAGATGTCCTTCATCTTCTGCAGCACCATCG 472666 >seq22 Length=2193588 Score = 192 bits (212), Expect = 7e-44 Identities = 463/696 (67%), Gaps = 11/696 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || || ||||| | ||| || || || || ||||| || || || |||| || Sbjct 443291 TCAAAGTCCTCGCCACCGAGGTGGGTGTCGCCGGCCGTCGCCTTCACCTCGAAGACGCCC 443232 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || || || | | || || ||||| |||||||| || || ||||| || || || ||| Sbjct 443231 CCCTCGATCGTCAGCAGCGTCACATCGAACGTACCGCCGCCAAGGTCGAAGATCAGCACG 443172 Query 7577 TTCGTATCGTCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| | || | | | | |||| || | ||||| || || || || || || || Sbjct 443171 TTCTTCTCCCCCTTGTCGCTCTTGCGGTCCATGCCGTAGGCAATCGCAGCGGCGGTCGGC 443112 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 || || || || || || ||| || |||||||| | | || || |||||||| || Sbjct 443111 TCGTTGATGATGCGCAGCACGTTGAGCCCAGCAATCGAGCCGGCGTCCTTCGTCGCCTGG 443052 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || ||||| ||||| |||||||| || ||||| || || |||||| | || ||| Sbjct 443051 CGCTGCGAGTCGTTGAAGTAGGCAGGCACCGTCACCACGGCGTCCTTCACCGGGGCTCCG 442992 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCC 7813 || || | || ||| | || ||||| || || ||||| | || ||||| || | Sbjct 442991 AGGTAGGCCTCGGCGGTTTCCTTCATCTTCTGCAGCACCATGGCCGAGATCTCCTCCGG- 442933 Query 7814 GCAAACTGT-TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC 7872 | | | || || || | || | | || || | |||| || || | | | Sbjct 442932 GAAGAAGGTCTTGGTGGCGCCTTGGTAGTCCACATTGATCACCGGCTTGCCGTCCTTGAC 442873 Query 7873 GGGGATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTT 7932 || || |||| | | ||| | ||||| ||| || | | |||| ||||| Sbjct 442872 GGTGA---CCTTGAAGGGCCAGTGCTTCATGTCGGACTGCAGGTCCGGGTCGTCGAACTT 442816 Query 7933 TCTTCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTT 7992 | || || | ||||| || || || || ||||| | ||||||||||| ||||| Sbjct 442815 GCGGCCAATCATGCGCTTCGCGTCGAAGACGGTGTTGTGCGGGTTCATGGCGACCTGGTT 442756 Query 7993 CTTCGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGT 8052 |||||| || || || | ||| || || | | |||| || ||||| || || || || Sbjct 442755 CTTCGCGGCATCGCCAACAAGTCGCTCCGTCT---CCGTGAAGGCGACATAGGACGGCGT 442699 Query 8053 CGTTCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGAC 8112 || ||||| || ||||||||||| || ||||| || ||||||| | |||||||||| Sbjct 442698 GGTGCGATTACCCTGGTCGTTCGCGATGATTTCCACCTGGTCGTTCTTGAAGACGCCGAC 442639 Query 8113 GCACGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 ||| || ||||| || || | || ||||| || || Sbjct 442638 GCAGGAGTACGTCGTACCGAGGTCGATACCAATGGC 442603 >seq328 Length=24538 Score = 149 bits (164), Expect = 8e-31 Identities = 239/341 (70%), Gaps = 8/341 (2%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| ||| || |||| ||| Sbjct 4918 TCAAAGTCCTCACCACCGAGGTGGGTGTCGCCGTTCGTCGCGACGACCTCGAAGAAACCC 4977 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | || ||| ||||| |||||||||||||| |||||||| | ||| | | Sbjct 4978 TCGTCGATCGTCAGCAGCGACACATCGAACGTACCACCACCAAGGTCAAAGACGAGAATG 5037 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | | ||||| ||| ||||| ||||| || || || || || || Sbjct 5038 TTCTTCTCGCCTGCCTTGTT------GAGGCCGTAGGCGATGGCGGCGGCGGTCGGCTCG 5091 Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | ||| ||| ||||| || || | ||| || || || || || || Sbjct 5092 TTGATGATGCGCACGAC-GTTGAGGCCGGCGATCTTGCCCGAGTCCTTGGTGGCCTGGCG 5150 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 |||| |||||| |||||||| || ||||| ||||| |||| | | || |||| ||||| Sbjct 5151 CTGCGCATCGTTGAAGTAGGCGGGCACCGTCACGACGGCGTTCTTCACCTTCTCGCCGAG 5210 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 | | | || | ||| || ||||| || || ||||||| Sbjct 5211 AAAGGTCTCGGAGATGTCCTTCATCTTCTGCAGCACCATCG 5251 >seq283 Length=25046 Score = 140 bits (154), Expect = 4e-28 Identities = 237/341 (70%), Gaps = 8/341 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || || |||||||| | ||| || || || ||||| ||| || |||| ||| Sbjct 15171 TCAAAGTCCTCACCACCGAGGTGGGTGTCGCCGTTCGTCGCGACGACCTCGAAGAAACCC 15112 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || || | | || ||| ||||| |||||||||||||| |||||||| | ||| | | Sbjct 15111 TCGTCGATCGTCAGCAGCGACACATCGAACGTACCACCACCAAGGTCAAAGACGAGAATG 15052 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 ||| | ||| | | ||||| || ||||| ||||| || || || || || || Sbjct 15051 TTCTTCTCGCCCGCCTTGTT------AAGGCCGTAGGCGATGGCGGCGGCGGTCGGCTCG 14998 Query 7637 TTAATAATACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || || || | ||| ||| || || || || | ||| || || || || || || Sbjct 14997 TTGATGATGCGCACGAC-GTTGAGACCGGCGATCTTGCCCGAGTCCTTGGTGGCCTGGCG 14939 Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755 |||| |||||| |||||||| || ||||| ||||| |||| | | || |||| ||||| Sbjct 14938 CTGCGCATCGTTGAAGTAGGCGGGCACCGTCACGACGGCGTTCTTCACCTTCTCGCCGAG 14879 Query 7756 ATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 | | | || | ||| || ||||| || || ||||||| Sbjct 14878 AAAGGTCTCGGAGATGTCCTTCATCTTCTGCAGCACCATCG 14838 >seq19 Length=1629678 Score = 91.5 bits (100), Expect = 2e-13 Identities = 109/147 (74%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 7590 CTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 |||||| ||| || | |||||||| | ||||| ||||| || || || | | ||| | Sbjct 1239260 CTTTGT-CTTGTCCATGCCGTACGCAAGCGCCGCAGCCGTCGGCTCGTTCACCACACGGA 1239318 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 |||||||||||| || || |||| || |||||||| || || |||| ||||| | Sbjct 1239319 TCACGTTCAGGCCAGCGATCGTGCCCGCGTCCTTCGTCGCCTGGCGCTGCGCGTCGTTGA 1239378 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGT 7736 ||||||| ||| ||| || ||||||| Sbjct 1239379 AGTAGGCGGGGCACGTCACCACCGCGT 1239405 Score = 86.0 bits (94), Expect = 8e-12 Identities = 108/147 (73%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 7590 CTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 |||||| ||| || | |||||||| | ||||| ||||| || || || | | ||| | Sbjct 1253619 CTTTGT-CTTGTCCATGCCGTACGCAAGCGCCGCAGCCGTCGGCTCGTTCACCACACGGA 1253677 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 |||||||||||| || || |||| || |||||||| || || |||| ||||| | Sbjct 1253678 TCACGTTCAGGCCAGCGATCGTGCCCGCGTCCTTCGTCGCCTGGCGCTGCGCGTCGTTGA 1253737 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGT 7736 |||| || ||| ||| || ||||||| Sbjct 1253738 AGTACGCGGGGCACGTCACCACCGCGT 1253764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129163864720