Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq22 86.0 7e-12 seq18 84.2 3e-11 seq10 84.2 3e-11 >seq22 Length=2193588 Score = 86.0 bits (94), Expect = 7e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 1114424 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 1114483 Query 136772 CCGTTGGGAACAGCTTTTAGAT 136793 | ||||||| || ||||| ||| Sbjct 1114484 CTGTTGGGAGCA-CTTTTCGAT 1114504 >seq18 Length=1454827 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Minus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 1231913 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 1231854 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 1231853 CTGTTGGGAGCA-CTTTT 1231837 >seq10 Length=920654 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 501594 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 501653 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 501654 CTGTTGGGAGCA-CTTTT 501670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972628112400