Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq20 89.7 4e-13 >seq20 Length=1996037 Score = 89.7 bits (98), Expect = 4e-13 Identities = 110/146 (75%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 52053 ATGGGCGACAAGTT-TGCGTCGTTCACGGCGCAAAAGGGGACGTGCGGAG--CCGTCCTG 52109 || ||||||||||| ||| | ||||| ||| ||||| ||| ||| | || | | Sbjct 65431 ATCGGCGACAAGTTCTGCAGCCGCCACGG-GCAGAAGGGCACGAACGGCATTCAGTTCCG 65373 Query 52110 ACCCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCC 52169 ||||||||||||||||||| || ||||| || ||||| ||| | || ||||||||| Sbjct 65372 --CCAGGAGGACATGCCCTTCAACCGCGACGGCGTCGTGCCGGACTTAATTATCAACCCC 65315 Query 52170 CACGCCTTTCCATCCAGGATGACCGT 52195 |||||| |||| ||| | ||||| || Sbjct 65314 CACGCCATTCCCTCCCGCATGACGGT 65289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408615319147634