Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq24 100 8e-16 >seq24 Length=2960390 Score = 100 bits (110), Expect = 8e-16 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Minus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCTT-GTCGTCGCTGTATTCTACAATCTCACA 155647 || || || || || || ||||| ||||||| | || || || | || || ||||| Sbjct 299980 ATGGAGGCGAGGTTGCACACCGCCGTCTCCTCCGGCGACG-TGAACTCGACGATCTCGGT 299922 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||||||||| || | |||||||||||| | ||||||||||| || || ||||| || || Sbjct 299921 GCACAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGC 299862 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 |||||||| || ||| | || |||||||| ||||| Sbjct 299861 GTCCTTGTAGAGGATGAAGGGCACGCCTGTCTCGATCTG 299823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471808963190346