Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq92 192 9e-43 seq14 179 6e-39 seq17 174 2e-37 seq24 167 4e-35 seq20 113 7e-19 seq244 102 1e-15 seq26 102 1e-15 seq9 102 1e-15 seq30 96.9 5e-14 seq10 93.3 7e-13 seq22 87.8 3e-11 >seq92 Length=13896 Score = 192 bits (212), Expect = 9e-43 Identities = 252/342 (74%), Gaps = 14/342 (4%) Strand=Plus/Plus Query 793869 GACGTCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCG 793928 ||||| | ||||| ||| | ||||||||||| |||||||||||| | |||| Sbjct 2843 GACGTGCCCTCCGAGCTCA---TCACGCCCGCCTTCTGATACTCGCCCACCTTCTTCTCG 2899 Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||||| ||||||||||| |||||| | ||| ||| || |||| Sbjct 2900 AAGAAGTTCGTCTTGCCCTGGAGCGAGATCATCTCCATGAAGTCGAA-GGGCTG--CGTC 2956 Query 793989 AGGT---AGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATG 794045 | || |||||||||| | ||||||||| ||||||||||||| || ||||| |||||| Sbjct 2957 ACGTTGTAGTGCTTCTCCAAACCGAGCGACACAAGCAGGCGGTCCGCCACGAACTCAATG 3016 Query 794046 TACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA 794105 ||||| ||| || |||||||||||||||| ||| ||| |||| || |||| || Sbjct 3017 TACTGCGCCATCAGCTCGGCGTTCATGCCGATCAGCCGCACCGGCAACGCGTCGCAGATG 3076 Query 794106 AACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGACGG 794164 ||||| |||||| | || || || | ||||||| || | | || ||| |||| | Sbjct 3077 AACTCGCGCTCGATGTTCACCGCGTCCAGAATGATCT-CCAGCACGCGCTCGCGCGACAG 3135 Query 794165 CTTG---TCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 794203 |||| | || | || |||| |||||||| || ||||| Sbjct 3136 CTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTC 3177 Score = 152 bits (168), Expect = 8e-31 Identities = 194/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || |||| || || |||||||||| | || |||||||| |||||||||| Sbjct 3512 GCCTCCGGCACTTTCACGTCGCTCATGAAGCGCTCTGCAAGGTTCTCGATCACGATGCCG 3571 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||| ||||||| |||||||| ||||||||||| ||||| |||||| ||||| | ||| Sbjct 3572 TCGCTGCCGGCGAAGAAGGCGAGCACGTGCTTGATGAAGTGCCGCTCGCCGTCGTTCAGC 3631 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 ||||||| | ||||| ||| ||||||| |||||| ||||| | | || | Sbjct 3632 CTCACCCAGTCCTTCATGTCGTTGCCAAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTC 3691 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || |||| ||| ||||| || || |||| Sbjct 3692 TCCTGCTCCTTGTACTTGCGCCAGATGTCAGGGTACATGATCGGGAAGAGCACGTAGCGG 3751 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 ||||| ||||| ||||||||||| Sbjct 3752 AACGGGTTATCGCGCTGCAGCGGCTCG 3778 Score = 149 bits (164), Expect = 1e-29 Identities = 230/325 (71%), Gaps = 10/325 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||| |||||||| ||| || || ||||| || ||||||||| Sbjct 3188 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAAGGTCAGCCCCGGCATCAGCCCGCGCTTC 3247 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || | || ||||| || ||||| ||||||||||||||||| ||||| Sbjct 3248 TTCAGCCAGAACAGCGCGCAGAAGGACCCGGAGAAGAAGATGCCCTCGACGGCAGCAAAC 3307 Query 794461 CCGACGAGCCGCTC--GGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 |||| |||||||| || ||| || |||| || |||||| || ||||| Sbjct 3308 CCGATCAGCCGCTCCTGG---AAG-CTC----GCCTCGCTGCCGATCCAACGCACCGCCC 3359 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 |||||||||| ||| | | || | ||| | ||| ||| | | || | ||||| Sbjct 3360 ACTCTGCCTTCTTCTGAATGCACGGGATCGTCTGGATCGCGTGCAGCAGACGCATCTTCT 3419 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | | |||| ||| ||| ||||| | || | |||||| ||||| ||||||||||| | Sbjct 3420 CCTCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGGATGTTCT 3479 Query 794639 CGATGGCGATCTGGAAGCCATAAAA 794663 | || | ||||||||| ||||| Sbjct 3480 CCATCATCAGCTGGAAGCCGTAAAA 3504 >seq14 Length=1309914 Score = 179 bits (198), Expect = 6e-39 Identities = 249/342 (73%), Gaps = 14/342 (4%) Strand=Plus/Minus Query 793869 GACGTCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCG 793928 ||||| | ||||| ||| | ||||||||||| ||||||||||| | ||| Sbjct 798441 GACGTGCCCTCCGAGCTCA---TCACGCCCGCCTTCTGGTACTCGCCCACCTTCTTCTCA 798385 Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||||| |||||||||| |||||| | ||| ||| || |||| Sbjct 798384 AAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA-GGGCTG--CGTC 798328 Query 793989 AGGT---AGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATG 794045 | || |||||||||| |||| |||||| ||||||||||||| || ||||| || ||| Sbjct 798327 ACGTTGTAGTGCTTCTCCAACCCCAGCGACACAAGCAGGCGGTCCGCCACGAACTCGATG 798268 Query 794046 TACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA 794105 ||||| ||| || ||| ||||||||| || ||| ||| ||||||| |||| || | Sbjct 798267 TACTGCGCCATCAGCTCGGAGTTCATGCCAATCAGCCGCACCGGCAGCGCGTCGCAGATA 798208 Query 794106 AACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGACGG 794164 ||||| |||||| | || || || | |||||||| || | | || ||| |||| | Sbjct 798207 AACTCGCGCTCGATGTTCACCGCGTCCACGATGATCT-CCAGCACGCGCTCGCGCGACAG 798149 Query 794165 CTTG---TCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 794203 |||| | || | || |||| |||||||| || ||||| Sbjct 798148 CTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTC 798107 Score = 152 bits (168), Expect = 8e-31 Identities = 194/267 (73%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || || | || || |||||||||| || |||||||| |||||||||| Sbjct 797772 GCCTCCGGCACCTTCACGTCGCTCATGAAGCGCTGAGCGAGGTTCTCGATCACGATGCCG 797713 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||| ||||||| |||||||| ||||||||||| ||||| |||||| ||||| | ||| Sbjct 797712 TCGCTGCCGGCGAAGAAGGCGAGCACGTGCTTGATGAAGTGCCGCTCGCCGTCGTTCAGC 797653 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 | | ||||| | ||||| ||| || |||| |||||| ||||| | | || | Sbjct 797652 GCCAACCAGTCCTTCATGTCGTTGCCAAGATCGATCTCCTCCAGCGTCCAGATGCAGCTC 797593 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || ||||| ||| |||||||| || |||| Sbjct 797592 TCCTGCTCCTTGTACTTGCGCCAGATGTCATGGTACATGATCGGGAACAGGACGTAGCGG 797533 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 |||||||||| | ||||||||||| Sbjct 797532 AAGGGGTTCTCGTGCTGCAGCGGCTCG 797506 Score = 131 bits (144), Expect = 3e-24 Identities = 226/325 (70%), Gaps = 10/325 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||| |||||||| ||| || || ||||| || || |||||| Sbjct 798096 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAAGGTCAGCCCCGGCATCAGCCCACGCTTC 798037 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || | || ||||| || ||||| ||||||||||||||||| ||||| Sbjct 798036 TTCAGCCAGAACAGCGCGCAGAAGGACCCGGAGAAGAAGATGCCCTCGACGGCAGCAAAC 797977 Query 794461 CCGACGAGCCGCTC--GGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 |||| |||||||| || ||| || |||| || |||||| || ||||| Sbjct 797976 CCGATCAGCCGCTCCTGG---AAG-CTC----GCCTCGCTGCCGATCCATCGCACCGCCC 797925 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 |||||||||| ||| | | || | ||| | || ||| | | || | ||||| Sbjct 797924 ACTCTGCCTTCTTCTGAATGCACGGGATCGTCTGAATCGCGTGCAGCAGACGCAGCTTCT 797865 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | | |||| ||| ||| ||||| | || | |||||| ||||| ||||||||||| | Sbjct 797864 CCTCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGGATGTTCT 797805 Query 794639 CGATGGCGATCTGGAAGCCATAAAA 794663 | || | |||||| || || || Sbjct 797804 CCATCATCAGCTGGAATCCGTAGAA 797780 >seq17 Length=1449266 Score = 174 bits (192), Expect = 2e-37 Identities = 248/342 (73%), Gaps = 14/342 (4%) Strand=Plus/Plus Query 793869 GACGTCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCG 793928 ||||| | ||||| ||| | ||||||||||| ||||||||||| | |||| Sbjct 520047 GACGTGCCCTCCGAGCTCA---TCACGCCCGCCTTCTGGTACTCGCCCACCTTCTTCTCG 520103 Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTC 793988 || ||||| |||||||||| |||||||||| |||||| | ||| ||| || |||| Sbjct 520104 AAGAAGTTTGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAA-GGGCTG--CGTC 520160 Query 793989 AGGT---AGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATG 794045 | || |||| ||||| | ||||||||| ||||||||||||| || ||||| || ||| Sbjct 520161 ACGTTGTAGTGTTTCTCCAAACCGAGCGACACAAGCAGGCGGTCCGCCACGAACTCGATG 520220 Query 794046 TACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCGACTCGCTGACA 794105 ||||| ||| || |||||||||||||||| ||| ||| |||| || |||| || Sbjct 520221 TACTGCGCCATCAGCTCGGCGTTCATGCCGATCAGCCGCACCGGCAACGCGTCGCAGATG 520280 Query 794106 AACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGCCTGGGCACG-TCGGACGACGG 794164 ||||| |||||| | || || || | ||||||| || | | || ||| |||| | Sbjct 520281 AACTCGCGCTCGATGTTCACCGCGTCCAGAATGATCT-CCAGCACGCGCTCGCGCGACAG 520339 Query 794165 CTTG---TCGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 794203 |||| | || | || |||| |||||||| || ||||| Sbjct 520340 CTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTC 520381 Score = 149 bits (164), Expect = 1e-29 Identities = 193/267 (72%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || || | || || |||||||||| | || |||||||| |||||||||| Sbjct 520716 GCCTCCGGCACCTTCACGTCGCTCATGAAGCGCTCTGCAAGGTTCTCGATCACGATGCCG 520775 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 |||||| ||||||| |||||||| ||||||||||| ||||| |||||| ||||| | ||| Sbjct 520776 TCGCTGCCGGCGAAGAAGGCGAGCACGTGCTTGATGAAGTGCCGCTCGCCGTCGTTCAGC 520835 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 ||||||| | ||||| ||| ||||||| |||||| ||||| | | || | Sbjct 520836 CTCACCCAGTCCTTCATGTCGTTGCCAAGGTCGATCTCCTCCAGCGTCCAGATGCAGCTC 520895 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || |||| ||| ||||| || || |||| Sbjct 520896 TCCTGCTCCTTGTACTTGCGCCAGATGTCAGGGTACATGATCGGGAAGAGCACGTAGCGG 520955 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTCG 796416 ||||| ||||| ||||||||||| Sbjct 520956 AACGGGTTATCGCGCTGCAGCGGCTCG 520982 Score = 136 bits (150), Expect = 6e-26 Identities = 227/325 (70%), Gaps = 10/325 (3%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||| |||||||| ||| || || ||||| || ||||||||| Sbjct 520392 CCCTCGTCGCGCGAGATCAGCTCGTTGCTGAAGGTCAGCCCCGGCATCAGCCCGCGCTTC 520451 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || ||||| || | || ||||| || ||||| ||||||||||||||||| || || Sbjct 520452 TTCAGCCAGAACAGCGCGCAGAAGGACCCGGAGAAGAAGATGCCCTCGACGGCAGCGAAC 520511 Query 794461 CCGACGAGCCGCTC--GGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCC 794518 |||| || ||||| || ||| || |||| || |||||| || ||||| Sbjct 520512 CCGATCAGGCGCTCCTGG---AAGC-TCG----CCTCGCTGCCGATCCAACGCACCGCCC 520563 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 |||||||||| ||| | | || | || | ||| ||| | | | | ||||| Sbjct 520564 ACTCTGCCTTCTTCTGAATGCACGGGATTGTCTGGATCGCGTGCAGCAACCGCATCTTCT 520623 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 | | |||| ||| ||| ||||| | || | |||||| ||||| ||||||||||| | Sbjct 520624 CCTCGCTGTCCGTGATGTACGTGTCCAGCAGCACCGAGTACGTCTCCGAGTGGATGTTCT 520683 Query 794639 CGATGGCGATCTGGAAGCCATAAAA 794663 | || || ||||||||| ||||| Sbjct 520684 CCATCATGAGCTGGAAGCCGTAAAA 520708 >seq24 Length=2960390 Score = 167 bits (184), Expect = 4e-35 Identities = 197/267 (74%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 2073537 GCACTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTT 2073596 || |||||| || ||||| ||||||| ||| || ||||| ||||| ||||| | ||||| Sbjct 299501 GCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGGCACCAACCCGTT 299442 Query 2073597 GGACTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAA 2073656 ||| ||||| ||||| || | |||| ||||| ||| || | |||||| || | Sbjct 299441 CGACGTCCCGTTCGTGCCGGCGATGTAGCTGCCCGCGGCACGAATGTTGTGCACGTGCAG 299382 Query 2073657 GCCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCC 2073716 ||||||||| || || || ||| ||| | ||||||| |||||||| ||||||||||| Sbjct 299381 GCCGATGCCACCAGCTGCTTTGCTGATCACGGCGCACTCCTTCAGCGTGTCGTAGATGCC 299322 Query 2073717 CTCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGT 2073776 ||||| ||| ||||| ||| || |||||||| | ||||| || ||| Sbjct 299321 GTCGATGCTGTCCTCCTTCGACGCCACGAGGAAGCACGAGCTCATCTGCGGCTTCGGCGT 299262 Query 2073777 GCCGGCATTGAAGAGCGTGGGCGTCGC 2073803 |||||| ||||||||||| ||||| || Sbjct 299261 GCCGGCGTTGAAGAGCGTCGGCGTGGC 299235 Score = 147 bits (162), Expect = 3e-29 Identities = 360/541 (67%), Gaps = 10/541 (2%) Strand=Plus/Minus Query 2069254 TCGACGGTAAACTGGATGGCGTTGGCGGCAGGCCGGGTGCGCAGATAGTACATGCCGGTC 2069313 || ||||| |||| |||||||| ||| || | | ||||||||| ||||||| || ||| Sbjct 300901 TCCACGGTGAACTTGATGGCGTCGGCAGCGGCCTTGGTGCGCAGGTAGTACACACCAGTC 300842 Query 2069314 TTGAGGCCGCGACGCCACGCGTAGGCGTGCATCGACGTGATG-GACTCGGCATTCGGGAC 2069372 ||||| |||| ||| | |||| | ||||||||||||| | | || | || | Sbjct 300841 TTGAGCCCGCACTCCCAGGTGTAGAAGAGCATCGACGTGATCTGCCCCGACGAGGGGCTC 300782 Query 2069373 GGCACAGTAGAGGTTGAGCGACTGGCTCTGGTCGACATAGGGCGCGCGGTCGGCCGCCAT 2069432 ||| | ||||||| |||||||| |||||| | || | |||| || ||||| Sbjct 300781 TGCAAAA-AGAGGTTTAGCGACTGCGACTGGTCAATGTACTGGCCGCGATCACGTGCCAT 300723 Query 2069433 GTCGATGGTCACGCGGTTGGACACCTCCCACACGGTCTTGAACAGGGCCTTGAGATGCGG 2069492 |||||| | ||| | | | |||||||||||| | | || |||| || | Sbjct 300722 GTCGATCAGCTTGCGCTGCGGGATCTCCCACACGGTGCGGTATAGCTCCTTCAGGTCATC 300663 Query 2069493 CGGCACCTCGTCGTCATCAAAGCCCTGCACCGAGCCCTGCGCTGCGATGAGGCGGTCGCG 2069552 || | |||| | | | | || || || | | ||||| || ||| Sbjct 300662 AGGGATGCTGTCG------ATGGACAGAACGGACCCGTTGTAGGAGATGATCTCGTTGCG 300609 Query 2069553 AAA-GTCGGGCGTCCACAGGCCGCGCGCCATCATGCGCTCGACCAGGTGGCGGTTGACCA 2069611 | ||| | ||||||| |||||| || | | | || |||| ||| |||| Sbjct 300608 CATCGTCTCGT-TCCACAGTCCGCGCTTGATGAGGTCCATCACGAGGTACTTGTTCACCA 300550 Query 2069612 CGGTAAAGTCGCCCGAGAGCACGCGGCGCGTGTAGATGTTGCTCGTGATGACCTCGCACG 2069671 | | || ||||| || || || || |||||||||| |||| | |||| | Sbjct 300549 CAGGGAACTCGCCGCTCAGGACACGACGGACGTAGATGTTGGAGGTGAAGGGCTCGAAGC 300490 Query 2069672 CCTCGGTGTTGCCCAGGATCTGCGACGTCGTGGCCGTGGGCATGAGCGCCACGAGCAGCG 2069731 |||| |||||||||||||||||||||||| ||| || ||||| |||||| ||||| | Sbjct 300489 ACTCGTTGTTGCCCAGGATCTGCGACGTCGAGGCGGTTGGCATCGGCGCCAGCAGCAGGG 300430 Query 2069732 AGTTGCGCAGGCCGTACTGTCGCACCAGCGCCCGCAGGGCGTCCCAGTCCCAGCGGCCGC 2069791 ||||||||| |||| ||| |||| | || |||| |||||||||||| || |||| Sbjct 300429 AGTTGCGCATGCCGACCTGCATCACCTTCTCCTTCAGGCTGTCCCAGTCCCACCGCCCGC 300370 Query 2069792 T 2069792 | Sbjct 300369 T 300369 Score = 145 bits (160), Expect = 1e-28 Identities = 314/468 (67%), Gaps = 12/468 (3%) Strand=Plus/Minus Query 2071551 CGCTGTCTCCGTTGGCGACGAAAACTGGACGACCTCGGTGCACAGGTTGGCCGACATCGT 2071610 ||| |||||| ||||||| |||| ||||| ||||||||||||||| | || | | Sbjct 299960 CGCCGTCTCCTCCGGCGACGTGAACTCGACGATCTCGGTGCACAGGTTCGAGCACTTGAT 299901 Query 2071611 GGTGCCCAGGTTCTGCTGGTTGCTGGTCAGGTTGACGGCGTCCTTGTGCAGCATGTAGGG 2071670 |||||| ||||||| |||||| | |||| |||||||||| || ||| |||| Sbjct 299900 GGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCACGCGTCCTTGTAGAGGATGAAGGG 299841 Query 2071671 CGCACCCGTCTCGATCTGCGCCGTGACGATGGCCGACCAAATTTGGCGCGCGGGCACCGA 2071730 | | || ||||||||||||| | || |||||| |||| | | |||| | | Sbjct 299840 CACGCCTGTCTCGATCTGCGACTCGAGGATGGCGAACCACACCTCCTGCGCCTGGAG--- 299784 Query 2071731 GGTC--CTCGC-GCGGCCCTNNNNNNNNNNNNNNNNNNAGAGGGCGTCAAAGGCGGCGCC 2071787 |||| | ||| |||||||| ||||| || || | |||| Sbjct 299783 GGTCTGCACGCCGCGGCCCTCGGCCTCGTAGCGCTCGTAGAGGCGCTCGAACTCTTCGCC 299724 Query 2071788 GTGGCACTCGTGCAGGCC-GGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAG 2071846 || ||| ||| || || |||| | | |||| | |||| ||| | || | Sbjct 299723 GTAGCAGTCGCTGAGCCCCGGGCAGGT-GCTCGGGTCCATCAGCGTCCACTTCCCCTCGC 299665 Query 2071847 TCACCACGCGGCGCATAAACAGGTC--GCACGTCCACAGGCCGTAAAAGAGATCGCGCGC 2071904 || ||| || ||| || ||||| | || |||||| |||| ||||| ||||| || Sbjct 299664 TCTTCACACGCTTCATGAAGAGGTCCGGGAC--CCACAGCGCGTAGAAGAGGTCGCGGGC 299607 Query 2071905 CCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTG 2071964 || | || ||||||||| ||| ||||| || || | | || ||||||||| Sbjct 299606 ACGCTGGTCATCCTTGCCGGTGTTGCGCTTCAGCAGCAGGAAGCCAAAGATGTCGGCGTG 299547 Query 2071965 CCACGGCTCCAGGTAGCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 ||||||||| |||||| ||| ||||||||||||||||| |||||||| Sbjct 299546 CCACGGCTCAAGGTAGATGGCGAAGGCGCCCTTGCGCTTACCGCCGCC 299499 Score = 95.1 bits (104), Expect = 2e-13 Identities = 125/169 (74%), Gaps = 6/169 (4%) Strand=Plus/Minus Query 1485467 CGTTGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTC-GCCG 1485525 |||||||||||| ||||||||||| ||||| | ||||||| ||||||| || | || Sbjct 80927 CGTTGTACTTGGCTACGGCCTTGGTGCCCTCACTCATGGCGTGCTTGGCCAGCTCAGGCG 80868 Query 1485526 CGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCG--ATCGTGTTGCGCTTGT 1485583 ||| | |||||| | | |||||| ||||||| |||||| | ||| || ||||| Sbjct 80867 -GCAGCAGCAGGCGTGCCGAGGTCTGAATCTCGC--GTGCCGTCAGCGTCTTCACCTTGT 80811 Query 1485584 TAGTGCGCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTC 1485632 || | ||||| | | ||||||||| |||||||| || |||||| Sbjct 80810 TAATCTTCGCCACGAAGATGGCCTCGGTCTGGATGCGGTTGAACATGTC 80762 >seq20 Length=1996037 Score = 113 bits (124), Expect = 7e-19 Identities = 144/193 (75%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 652894 CGAGGTGCACCCGCTGCTCATGCTGGGCGCCTGCGCTTCCATCATCCCCTTTTCCAACCA 652953 |||| || ||||| | || |||||| |||||| ||||||||||||| | ||||| Sbjct 66131 CGAGATGGACCCGTCCATGATCCTGGGCATCTGCGCCTCCATCATCCCCTACCCGAACCA 66072 Query 652954 CAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGCAGAGCA-AGGCCGTCG 653012 ||||||| | || ||||||| ||||||| | ||||||||||||||| || || | Sbjct 66071 CAACCAGTCCCCACGCAACACCTACCAGTCCGCCATGGGCAAGCAGGCCATGGGTATTTA 66012 Query 653013 TGTCGCTCAACGCCGATCACGC-CATCGACACCGTGTCGCACGCCCTCTGCTACCCGCAG 653071 || | | |||| | | || || ||| |||||| | |||| ||||| |||||||||| Sbjct 66011 TGCCTC-CAACTTCCA-CATGCGCATGGACACCACCGCCCACGTCCTCTTCTACCCGCAG 65954 Query 653072 GTGCCGCTGGTGC 653084 ||||||||||| Sbjct 65953 AAGCCGCTGGTGC 65941 Score = 107 bits (118), Expect = 3e-17 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 429059 GGAGCGATTCAAGGGCAAGGAGGGCCGGATCCGCGGCAATTGCATGGGCAAGCGCGTCAA 429118 |||||| ||||||||||| ||||| | || ||||| ||||||||||||||| | Sbjct 1731809 GGAGCGCCTCAAGGGCAAGTTCGGCCGCGTGCGGGGCAACCTGATGGGCAAGCGCGTCGA 1731750 Query 429119 CTTTACGGCGCGCGCCGTCATCAGTCCCGACCCCGAAATCGACATTGACGAGGTGGGCGT 429178 ||| | || ||| | || |||| ||||||| | |||||| | |||||||| ||||| Sbjct 1731749 CTTCTCCGCCCGCACTGTGATCACCGGCGACCCCAACATCGACGTCGACGAGGTCGGCGT 1731690 Query 429179 GCCCTATGAGATCGTCAAGACGCTCACCTTTCCCGAGCGCGT 429220 ||||| ||| || |||||||||||| || ||||| || Sbjct 1731689 GCCCTTCTCCGTCGCCATGACGCTCACCTTCCCGGAGCGGGT 1731648 Score = 86.0 bits (94), Expect = 1e-10 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 429632 CACCTTCCGGCTCAACCTGGCCGTGACGGGCACCTACAACGCCGACTTTGACGGCGACGA 429691 ||||||||| |||||||| || ||| | |||||||||||||||||||| || || Sbjct 1731395 CACCTTCCGCCTCAACCTCTCCTGCACGACGCCGTACAACGCCGACTTTGACGGTGATGA 1731336 Query 429692 GATGAACCTGCACGTGCCCCAGTCG 429716 ||||||||||||||| || |||||| Sbjct 1731335 GATGAACCTGCACGTTCCGCAGTCG 1731311 >seq244 Length=18220 Score = 102 bits (112), Expect = 1e-15 Identities = 138/185 (75%), Gaps = 8/185 (4%) Strand=Plus/Minus Query 1485481 ACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTC-GCCGCGCATGATCAGGCG 1485539 |||||||| || ||||| | | |||||| | ||||| || |||| ||| | | ||| Sbjct 938 ACGGCCTTCGTGCCCTCCGCCATCGCGTGCTTCGCCAGCTCAGCCG-GCAGCACGATGCG 880 Query 1485540 CACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT-GCGCGC-CAGG 1485597 |||||| ||||| |||||||||| || | ||| ||||| || | |||||| || Sbjct 879 CACGGCCGTCTGCATCTCGCGGGCACCCAGGGTG---CGCTTCTTGTTCGCGCGCACAAT 823 Query 1485598 CG-GCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGA 1485656 || | | ||||| || ||||||| || |||| ||||||||| |||||||||||||| Sbjct 822 CGAGGCAGCCTCCGTCGCGATGCGCTCCATCACGTCGTTGACGTACGAGTTCATGATCTT 763 Query 1485657 CATCG 1485661 ||||| Sbjct 762 CATCG 758 >seq26 Length=613868 Score = 102 bits (112), Expect = 1e-15 Identities = 138/185 (75%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 1485481 ACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTC-GCCGCGCATGATCAGGCG 1485539 |||||||| || ||||| | | |||||| | ||||| || |||| ||| | | ||| Sbjct 553958 ACGGCCTTCGTGCCCTCCGCCATCGCGTGCTTCGCCAGCTCAGCCG-GCAGCACAATGCG 554016 Query 1485540 CACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT-GCGCGC-CAGG 1485597 |||||| ||||| |||||||||| || | ||| ||||| || | |||||| || Sbjct 554017 CACGGCCGTCTGCATCTCGCGGGCACCCAGGGTG---CGCTTCTTGTTCGCGCGCACAAT 554073 Query 1485598 CGGC-CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGA 1485656 || | | ||||| || ||||||| || |||| ||||||||| |||||||||||||| Sbjct 554074 CGACGCAGCCTCCGTCGCGATGCGCTCCATCACGTCGTTGACGTACGAGTTCATGATCTT 554133 Query 1485657 CATCG 1485661 ||||| Sbjct 554134 CATCG 554138 Score = 98.7 bits (108), Expect = 2e-14 Identities = 137/185 (74%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 1485481 ACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTC-GCCGCGCATGATCAGGCG 1485539 |||||||| || ||||| | | |||||| | ||||| || |||| ||| | | ||| Sbjct 555320 ACGGCCTTCGTGCCCTCCGCCATCGCGTGCTTCGCCAGCTCAGCCG-GCAGCACAATGCG 555378 Query 1485540 CACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT-GCGCGC-CAGG 1485597 |||||| ||||| |||||||||| || | ||| ||||| || | |||||| || Sbjct 555379 CACGGCCGTCTGCATCTCGCGGGCACCCAGGGTG---CGCTTCTTGTTCGCGCGCACAAT 555435 Query 1485598 CG-GCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGA 1485656 || | | ||||| || | ||||| || |||| ||||||||| |||||||||||||| Sbjct 555436 CGAGGCAGCCTCCGTCGCAATGCGCTCCATCACGTCGTTGACGTACGAGTTCATGATCTT 555495 Query 1485657 CATCG 1485661 ||||| Sbjct 555496 CATCG 555500 >seq9 Length=823452 Score = 102 bits (112), Expect = 1e-15 Identities = 139/186 (75%), Gaps = 10/186 (5%) Strand=Plus/Plus Query 1485481 ACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTC-GCCGCGCATGATCAGGCG 1485539 |||||||| || ||||| | | |||||| | ||||| || |||| ||| | | ||| Sbjct 24819 ACGGCCTTCGTGCCCTCCGCCATCGCGTGCTTCGCCAGCTCAGCCG-GCAGCACGATGCG 24877 Query 1485540 CACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGC-CAGG- 1485597 |||||| ||||| |||||||||| || | ||| ||||| || || ||||| || | Sbjct 24878 CACGGCCGTCTGCATCTCGCGGGCACCCAGGGTG---CGCTTCTT-GTTCGCGCGCACGA 24933 Query 1485598 -CGGC-CGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCG 1485655 || | | ||||| || ||||||| || |||| ||||||||| |||||||||||||| Sbjct 24934 TCGACGCAGCCTCCGTCGCGATGCGCTCCATCACGTCGTTGACGTACGAGTTCATGATCT 24993 Query 1485656 ACATCG 1485661 ||||| Sbjct 24994 TCATCG 24999 Score = 102 bits (112), Expect = 1e-15 Identities = 138/185 (75%), Gaps = 8/185 (4%) Strand=Plus/Plus Query 1485481 ACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTC-GCCGCGCATGATCAGGCG 1485539 |||||||| || ||||| | | |||||| | ||||| || |||| ||| | | ||| Sbjct 25753 ACGGCCTTCGTGCCCTCCGCCATCGCGTGCTTCGCCAGCTCAGCCG-GCAGCACGATGCG 25811 Query 1485540 CACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGT-GCGCGC-CAGG 1485597 |||||| ||||| |||||||||| || | ||| ||||| || | |||||| || Sbjct 25812 CACGGCCGTCTGCATCTCGCGGGCACCCAGGGTG---CGCTTCTTGTTCGCGCGCACAAT 25868 Query 1485598 CG-GCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGA 1485656 || | | ||||| || ||||||| || |||| ||||||||| |||||||||||||| Sbjct 25869 CGAGGCAGCCTCCGTCGCGATGCGCTCCATCACGTCGTTGACGTACGAGTTCATGATCTT 25928 Query 1485657 CATCG 1485661 ||||| Sbjct 25929 CATCG 25933 >seq30 Length=661897 Score = 96.9 bits (106), Expect = 5e-14 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 1485481 ACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTC-GCCGCGCATGATCAGGCG 1485539 || ||||| || ||||| | | |||||| | ||||| || |||| ||| | | ||| Sbjct 570802 ACAGCCTTCGTGCCCTCCGCCATCGCGTGCTTCGCCAGCTCAGCCG-GCAGCACGATGCG 570744 Query 1485540 CACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGCGCCAGGCG 1485599 ||||||| |||| | |||||||| || | ||| |||||| |||||| | | Sbjct 570743 CACGGCGATCTGCACCTCGCGGGCACCAAGGGTGCGCTTCTTGTTCGTGCGCACGATCGA 570684 Query 1485600 GCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACAT 1485659 | | ||||| || ||||||| || |||| ||||||||| |||||||||||||| ||| Sbjct 570683 GGCAGCCTCCGTCGCGATGCGCTCCATCACGTCGTTGACGTACGAGTTCATGATCTTCAT 570624 Query 1485660 CG 1485661 || Sbjct 570623 CG 570622 >seq10 Length=920654 Score = 93.3 bits (102), Expect = 7e-13 Identities = 91/115 (79%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 652886 ACGCACGTCGAGGTGCACCCGCTGCTCA-TGCTGGGCGCCTGCGCTTCCATCATCCCCTT 652944 |||||| |||||||| | ||||| |||| || |||||| | ||| ||||||||||| Sbjct 13744 ACGCACCTCGAGGTGGAGCCGCT-CTCACTGTTGGGCGTCGTGGCTGGCATCATCCCCTA 13686 Query 652945 TTCCAACCACAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGCAG 652999 | |||||||||| || ||||||||| | |||| ||||||||||||||||| Sbjct 13685 CCCGCACCACAACCAAGCAGCGCGCAACACTTTCCAGTCGGCCATGGGCAAGCAG 13631 >seq22 Length=2193588 Score = 87.8 bits (96), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 431099 CGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAGACGGGCTACATCCAGCG 431158 ||| |||||||| |||||||||||||||||||||| ||||||||||| |||||| | || Sbjct 783728 CGGTCGCGAGGGCATCGTCGACACGGCCGTCAAGACAGCCGAGACGGGGTACATCTACCG 783787 Query 431159 TCGGTGCATCAAATCGATGGAGA 431181 || || ||| ||||||||| Sbjct 783788 CCGACTCAGCAAGGCGATGGAGA 783810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916197680451062