Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq21 82.4 2e-11 >seq21 Length=2191012 Score = 82.4 bits (90), Expect = 2e-11 Identities = 210/315 (67%), Gaps = 6/315 (2%) Strand=Plus/Minus Query 37204 GGCGACCTGGGCATCATCCCTGGCTCGATGGGTGC--GAAGTCATTCATCGTTCGCGGCA 37261 || || |||| | | || ||||| || ||||| || | || | ||| || || || | Sbjct 237377 GGAGAGCTGGCCGTGATTCCTGGGTCCATGGGGGCTCGCAGCTA--CATTGTGCGAGGAA 237320 Query 37262 AGGGAAATTCCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGG 37321 |||| || ||| ||| || ||| || ||||||||||| ||||| | Sbjct 237319 AGGGCAACCCCGCGAGCCACTGTTCCTGCTCGCATGGTGCCGGTCGCCGCTACAGCCGTG 237260 Query 37322 CCGAAGCAAAACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGT 37381 || || ||||| || || | | ||||| ||| |||||| || ||||||| Sbjct 237259 GTGAGGCGCGCCGCCGCTTTACCATTGCCGATCACATGGCCGCCACCGCTGGCATCGAGT 237200 Query 37382 GCCGCAAAGATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGG 37441 |||| || |||| | || | || || || |||||||| |||||||||||||| |||| Sbjct 237199 GCCGGAAGGATGTCAGCGTCCTGGATGAAACACCAGCGGCATACAAGGACATCGACGCGG 237140 Query 37442 TCATGGCCGCGCAATCCGCCCTGGTGGACATCGT-GCACACGCTGCGCCAAGTCGTTTGC 37500 | ||||| || ||| | |||| || | || ||| | ||||| || || | || Sbjct 237139 TGATGGCGGCCCAACAGGATTTGGTCGAGGTGGTGGCAGTC-CTGCGGCAGGTGCTGTGT 237081 Query 37501 GTGAAGGGTTGAGGA 37515 |||||||| ||| || Sbjct 237080 GTGAAGGGGTGACGA 237066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139282442473496