Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq10 251 8e-62 >seq10 Length=920654 Score = 251 bits (278), Expect = 8e-62 Identities = 431/618 (70%), Gaps = 23/618 (4%) Strand=Plus/Minus Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 ||||| | ||||||||||||| ||| || |||||||| || ||||||||||| | || Sbjct 782117 TTCAGCGCCTCCACGTGGTTGCTGTACACATGCGCGTCACCGAGGGTGTGCACGAGCTCG 782058 Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036 || || || |||||| | | ||| | || || |||| | ||| || ||| Sbjct 782057 CCAGGACGCAGCCCGGTCGCCTTGGCAATCAGAATCGTCAGCAAGGCGTACGACGCGATG 781998 Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC 147096 |||||||| || || || |||||||| | ||| | |||||||||| ||| || |||||| Sbjct 781997 TTGAAGGGCACGCCGAGACCCATGTCGCACGAGCGCTGGTACAGCATGCAGGACAGCTCC 781938 Query 147097 C-CGTCGGC-----CACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCATGGCG 147150 |||| || |||||| ||||||| |||| |||||| |||||||||||||| | Sbjct 781937 TTCGTCTGCGTGTTCACGTAGAACTGGCCGAGGAGGTGGCAGGGCGGCAGCGCCATCTTG 781878 Query 147151 GGCAGGTCCGCG---GGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTC 147207 |||| |||| |||||||| |||| || | ||| || | | | ||||||| || Sbjct 781877 TGCAG---CGCGCACGGGTTCCACGCCGTGAAGAGCAGACGGCGGTCGTTGGGGTTCGTC 781821 Query 147208 TTAA---TCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC 147264 || | |||| |||| | | | | ||| |||||||||| ||| |||| || | Sbjct 781820 TTGAGGGTCTCGACGAT---CGTCTTGATCTGATCCACGCCCTCGCCGTCGTAATTCGCG 781764 Query 147265 CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGG 147324 || || | |||| |||||| ||||| | |||||||||||||||||| ||||| ||| Sbjct 781763 TCGAAGCCTTTGTACTCGGCCCCGAAGTGGCGCCACTGGAAGCCGTACACCGGCCCGAGG 781704 Query 147325 TCGCCGGGCTTTCTGTGCGAGAAGCCCGC-CCGCTTGAGAAACTCGGGGGACCCGTGGGC 147383 || ||| | | || ||||| | | | ||| |||||| |||| |||| | | Sbjct 781703 TCCATCTCCTTATTCTCCG-TCAGCCCACGGCTGTCGAGGAACTCGCGGGAGCCGTTGCC 781645 Query 147384 GTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAA 147443 |||||||||| | ||||| | | ||| || | || || ||| |||| ||| Sbjct 781644 GTCCCAGATGTGAATGTCCTTGTCTGCCAGCAGCTGCGCGTTTGTCTCGCCACGGAGGAA 781585 Query 147444 CCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAA 147503 ||||| ||||| || | || || | ||| ||||| | ||| || |||||||| || | Sbjct 781584 CCAGATGAGCTCTTCGCAGACGCCACGCCAGAAGACGCGCTTCGTCGTCAGCAGCGGCAG 781525 Query 147504 CTG---GTCCCTCAGCGA 147518 ||| ||||| |||||| Sbjct 781524 CTGGTTGTCCCGCAGCGA 781507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583484659531200