Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq92 298 8e-75 seq17 280 2e-69 seq14 271 1e-66 seq24 178 2e-38 seq10 127 3e-23 seq20 107 3e-17 seq26 91.5 2e-12 seq9 89.7 7e-12 seq244 87.8 3e-11 >seq92 Length=13896 Score = 298 bits (330), Expect = 8e-75 Identities = 428/596 (72%), Gaps = 9/596 (2%) Strand=Plus/Minus Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774 ||||||||||| ||||||||||||| ||||| || || ||||| ||| |||| Sbjct 3778 CGAGCCGCTGCAGCGCGATAACCCGTTCCGCTACGTGCTCTTCCCGATCATGTACCCTGA 3719 Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 || ||| | |||| || || ||| || | | ||||| |||||| |||||| Sbjct 3718 CATCTGGCGCAAGTAC-AAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGACC 3660 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGC 1455894 | ||| ||||| | |||||||| ||||| ||||| |||||| || |||||||||| Sbjct 3659 TTGGCAACGACATGAAGGACTGGGTGAGGCTGAACGACGGCGAGCGGCACTTCATCAAGC 3600 Query 1455895 ACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGC 1455954 |||| |||||||| || ||||| |||||| ||||||||| ||||||||| || | ||| Sbjct 3599 ACGTGCTCGCCTTCTT-CGCCGGCAGCGACGGCATCGTGATCGAGAACCTTGCAGAGCGC 3541 Query 1455955 TTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATC 1456014 || |||| || || || |||| ||||| ||| ||||||||| |||||| | || Sbjct 3540 TTCATGAGCGACGTGAAAGTGCCGGAGGCGCGTGCGTTTTACGGCTTCCAGCTGATGATG 3481 Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||||||||| || || |||||| | ||| | ||||| ||| ||| |||| | Sbjct 3480 GAGAACATCCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCACGGACAGCGAG 3421 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGAC 1456134 |||||| | || | | ||| ||| | ||| | |||| | ||| ||||| || Sbjct 3420 GAGAAGATGCGTCTGCTGCACGCGATCCAGACGATCCCGTGCATTCAGAAGAAGGCAGAG 3361 Query 1456135 TGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCT 1456194 |||||| || |||||| || |||| ||| ||| |||||||| |||| | Sbjct 3360 TGGGCGGTGCGTTGGATCGGCAGCGAGG----CGA-GCTTCCAGGAGCGGCTGATCGGGT 3306 Query 1456195 TTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGA 1456253 |||| | ||||||||||||||| ||||| || |||||||| | || ||||| |||| Sbjct 3305 TTGCTGCCGTCGAGGGCATCTTCTTCTCCGGGTCCTTCTGCGCGCTGTTCTGGCTGAAGA 3246 Query 1456254 AGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||||||| || ||||| || | | ||| |||||||| | ||| |||||||| Sbjct 3245 AGCGCGGGCTGATGCCGGGGC-TGACCTTCAGCAACGAGCTGATCTCGCGCGACGA 3191 Score = 145 bits (160), Expect = 1e-28 Identities = 218/299 (73%), Gaps = 18/299 (6%) Strand=Plus/Minus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAA---CAAGCCGTCGACCG 1456508 ||||| ||||| || || ||||| |||| || | |||| ||||| |||| || Sbjct 3185 TGCACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGTCGCGCG 3126 Query 1456509 A---CGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCG 1456565 | ||||| | ||||||| | || || || | |||||| ||||| || ||| Sbjct 3125 AGCGCGTGCT---GGAGATCATTCTGGACGCGGTGAACATCGAGCGCGAGTTCATCTGCG 3069 Query 1456566 AGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAA 1456625 | || |||||||| ||| ||||||||||||||| ||| ||| ||||||||||| Sbjct 3068 ACGCGTTGCCGGTGCGGCTGATCGGCATGAACGCCGA-GCTGATGGCGCAGTACATTGAG 3010 Query 1456626 TTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACGG 1456682 || || || ||||||||||| | | ||||||| | ||||||||||||| || |||| Sbjct 3009 TTC-GTGGCGGACCGCCTGCTTGTGTCGCTCGGTTT-GGAGAAGCACTACAACGTGACG- 2953 Query 1456683 CCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG 1456741 || ||| ||| | |||||| ||||||||||| |||||||||| ||||| |||||| Sbjct 2952 -CAGCCC-TTCGACTTCATGGAGATGATCTCGCTCCAGGGCAAGACGAACTTCTTCGAG 2896 >seq17 Length=1449266 Score = 280 bits (310), Expect = 2e-69 Identities = 424/596 (71%), Gaps = 9/596 (2%) Strand=Plus/Minus Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774 ||||||||||| ||||||||||||| ||||| || || ||||| ||| |||| Sbjct 520982 CGAGCCGCTGCAGCGCGATAACCCGTTCCGCTACGTGCTCTTCCCGATCATGTACCCTGA 520923 Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 || ||| | |||| || || ||| || | | ||||| |||||| |||||| Sbjct 520922 CATCTGGCGCAAGTAC-AAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGACC 520864 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGC 1455894 | ||| ||||| | |||||||| ||||| ||||| |||||| || |||||||||| Sbjct 520863 TTGGCAACGACATGAAGGACTGGGTGAGGCTGAACGACGGCGAGCGGCACTTCATCAAGC 520804 Query 1455895 ACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGC 1455954 |||| |||||||| || ||||| |||||| ||||||||| ||||||||| || | ||| Sbjct 520803 ACGTGCTCGCCTTCTT-CGCCGGCAGCGACGGCATCGTGATCGAGAACCTTGCAGAGCGC 520745 Query 1455955 TTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATC 1456014 || |||| || || | |||| ||||| ||| ||||||||| |||||| || || Sbjct 520744 TTCATGAGCGACGTGAAGGTGCCGGAGGCGCGTGCGTTTTACGGCTTCCAGCTCATGATG 520685 Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||||||||| || || |||||| | ||| | ||||| ||| ||| |||| | Sbjct 520684 GAGAACATCCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCACGGACAGCGAG 520625 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGAC 1456134 |||||| | | | | ||| ||| | || | |||| | ||| ||||| || Sbjct 520624 GAGAAGATGCGGTTGCTGCACGCGATCCAGACAATCCCGTGCATTCAGAAGAAGGCAGAG 520565 Query 1456135 TGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCT 1456194 |||||| || |||||| || |||| ||| ||| ||||| || |||| | Sbjct 520564 TGGGCGGTGCGTTGGATCGGCAGCGAGG----CGA-GCTTCCAGGAGCGCCTGATCGGGT 520510 Query 1456195 TTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGA 1456253 | || | ||||||||||||||| ||||| || |||||||| | || ||||| |||| Sbjct 520509 TCGCTGCCGTCGAGGGCATCTTCTTCTCCGGGTCCTTCTGCGCGCTGTTCTGGCTGAAGA 520450 Query 1456254 AGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 ||||||| || ||||| || | | ||| |||||||| | ||| |||||||| Sbjct 520449 AGCGCGGGCTGATGCCGGGGC-TGACCTTCAGCAACGAGCTGATCTCGCGCGACGA 520395 Score = 136 bits (150), Expect = 6e-26 Identities = 236/331 (71%), Gaps = 19/331 (6%) Strand=Plus/Minus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAA---CAAGCCGTCGACCG 1456508 ||||| ||||| || || ||||| |||| || | |||| ||||| |||| || Sbjct 520389 TGCACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGTCGCGCG 520330 Query 1456509 A---CGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCG 1456565 | ||||| | ||||||| | || || || | |||||| ||||| || ||| Sbjct 520329 AGCGCGTGCT---GGAGATCATTCTGGACGCGGTGAACATCGAGCGCGAGTTCATCTGCG 520273 Query 1456566 AGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAA 1456625 | || |||||||| ||| ||||||||||||||| ||| ||| |||||||| | | Sbjct 520272 ACGCGTTGCCGGTGCGGCTGATCGGCATGAACGCC-GAGCTGATGGCGCAGTACATCG-A 520215 Query 1456626 TTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACGG 1456682 || || || ||||||||||| | | ||||||| | |||||| |||||| || |||| Sbjct 520214 GTTCGTGGCGGACCGCCTGCTTGTGTCGCTCGG-TTTGGAGAAACACTACAACGTGACG- 520157 Query 1456683 CCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG- 1456741 || ||| ||| | |||||| |||||||||| |||||||||| ||||| |||||| Sbjct 520156 -CAGCCC-TTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACAAACTTCTTCGAGA 520099 Query 1456742 CGCCGCGTGGCGAGTACGCCAAGGCCGGCGT 1456772 | | ||||||||| ||||| ||||| Sbjct 520098 AGAAGGTGGGCGAGTACCAGAAGGCGGGCGT 520068 >seq14 Length=1309914 Score = 271 bits (300), Expect = 1e-66 Identities = 422/596 (71%), Gaps = 9/596 (2%) Strand=Plus/Plus Query 1455715 CGAGCCGCTGCTGCGCGATAACCCGAACCGCTTTGTCCTGTTCCCCATCCGCTACCAGCG 1455774 ||||||||||| || ||| ||||| ||||| ||||||||||| ||| ||||| Sbjct 797506 CGAGCCGCTGCAGCACGAGAACCCCTTCCGCTACGTCCTGTTCCCGATCATGTACCATGA 797565 Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 || ||| | |||| || || ||| || | | ||||| |||||| |||| | Sbjct 797566 CATCTGGCGCAAGTAC-AAGGAGCAGGAGAGCTGCATCTGGACGCTGGAGGAGATCGATC 797624 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGC 1455894 | ||| ||||| | ||||| || |||||| ||||| |||||| || |||||||||| Sbjct 797625 TTGGCAACGACATGAAGGACTGGTTGGCGCTGAACGACGGCGAGCGGCACTTCATCAAGC 797684 Query 1455895 ACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGC 1455954 |||| |||||||| || ||||| |||||| ||||||||| ||||||||| || ||| Sbjct 797685 ACGTGCTCGCCTTCTT-CGCCGGCAGCGACGGCATCGTGATCGAGAACCTCGCTCAGCGC 797743 Query 1455955 TTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCATC 1456014 || |||| || || | |||| ||||| ||| ||| ||||| |||||| | || Sbjct 797744 TTCATGAGCGACGTGAAGGTGCCGGAGGCGCGTGCGTTCTACGGATTCCAGCTGATGATG 797803 Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||||||||| || || |||||| | ||| | ||||| ||| ||| |||| | Sbjct 797804 GAGAACATCCACTCGGAGACGTACTCGGTGCTGCTGGACACGTACATCACGGACAGCGAG 797863 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGAC 1456134 |||||| | || | | ||| || | ||| | |||| | ||| ||||| || Sbjct 797864 GAGAAGCTGCGTCTGCTGCACGCGATTCAGACGATCCCGTGCATTCAGAAGAAGGCAGAG 797923 Query 1456135 TGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCT 1456194 |||||| || |||||| || |||| ||| ||| |||||||| |||| | Sbjct 797924 TGGGCGGTGCGATGGATCGGCAGCGAGG----CGA-GCTTCCAGGAGCGGCTGATCGGGT 797978 Query 1456195 TTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGA 1456253 |||| | ||||||||||||||| ||||| || |||||||| | || ||||| |||| Sbjct 797979 TTGCTGCCGTCGAGGGCATCTTCTTCTCCGGGTCCTTCTGCGCGCTGTTCTGGCTGAAGA 798038 Query 1456254 AGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 |||| || || ||||| || | | ||| |||||||| | ||| |||||||| Sbjct 798039 AGCGTGGGCTGATGCCGGGGC-TGACCTTCAGCAACGAGCTGATCTCGCGCGACGA 798093 Score = 141 bits (156), Expect = 1e-27 Identities = 237/331 (72%), Gaps = 19/331 (6%) Strand=Plus/Plus Query 1456452 TGCACTGTGACTTTGCCTGTCTGCTCTACACGATGCTCGTCAA---CAAGCCGTCGACCG 1456508 ||||| ||||| || || ||||| |||| || | |||| ||||| |||| || Sbjct 798099 TGCACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGTCGCGCG 798158 Query 1456509 A---CGTGCCCAAGCAGATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCG 1456565 | ||||| | |||||||||| || || || | |||||| |||||| || ||| Sbjct 798159 AGCGCGTGCT---GGAGATCATCGTGGACGCGGTGAACATCGAGCGCGAGTTTATCTGCG 798215 Query 1456566 AGTCGCTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAA 1456625 | ||||||||||| ||| || ||||||||| || ||| ||| |||||||| | | Sbjct 798216 ACGCGCTGCCGGTGCGGCTGATTGGCATGAACTCC-GAGCTGATGGCGCAGTACATCG-A 798273 Query 1456626 TTTTGTCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTAC--CG-GACGG 1456682 || || || ||||||||||| | | |||| || | ||||||||||||| || |||| Sbjct 798274 GTTCGTGGCGGACCGCCTGCTTGTGTCGCTGGGGT-TGGAGAAGCACTACAACGTGACG- 798331 Query 1456683 CCAACCCGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAG- 1456741 || ||| ||| | |||||| |||||||||| |||||||||| ||||| || ||| Sbjct 798332 -CAGCCC-TTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTTGAGA 798389 Query 1456742 CGCCGCGTGGCGAGTACGCCAAGGCCGGCGT 1456772 | | ||||||||| ||||| ||||| Sbjct 798390 AGAAGGTGGGCGAGTACCAGAAGGCGGGCGT 798420 >seq24 Length=2960390 Score = 178 bits (196), Expect = 2e-38 Identities = 232/321 (72%), Gaps = 0/321 (0%) Strand=Plus/Plus Query 259865 CTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCAGTTGTTCACCTCAGCGACG 259924 ||| || |||| | || || ||| | ||||||| || || |||||| || ||| Sbjct 299181 CTGAAGAACGTCCGCGAGACGTACAACCTCATGTCGAAGGGCTTCTTCACCCACGCCACG 299240 Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || |||||||| || |||||||||||| ||||||| |||||||| || ||| Sbjct 299241 CCGACGCTCTTCAACGCCGGCACGCCGAAGCCGCAGATGAGCTCGTGCTTCCTCGTGGCG 299300 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||| || ||||| |||||||| |||||||| ||| ||||||| | ||| | Sbjct 299301 TCGAAGGAGGACAGCATCGACGGCATCTACGACACGCTGAAGGAGTGCGCCGTGATCAGC 299360 Query 260045 AAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTACGTG 260104 || || || || |||||||| | || ||||| | || ||||||||| |||| | Sbjct 299361 AAAGCAGCTGGTGGCATCGGCCTGCACGTGCACAACATTCGTGCCGCGGGCAGCTACATC 299420 Query 260105 GCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGACACG 260164 || ||||| ||||| ||| ||||| | ||||| ||||| ||||| || ||| ||||| Sbjct 299421 GCCGGCACGAACGGGACGTCGAACGGGTTGGTGCCGATGCTGCGCGTGTTCAACAACACG 299480 Query 260165 GCGCGCTACGTCGACCAGTGC 260185 || |||||||| |||||| || Sbjct 299481 GCCCGCTACGTGGACCAGGGC 299501 Score = 143 bits (158), Expect = 4e-28 Identities = 363/543 (67%), Gaps = 12/543 (2%) Strand=Plus/Plus Query 262870 AGCGGCCGCTGGGACTGGGACGCACTGCGGGCGTCGGTTCGACAGCATGGCCTGCGCAAC 262929 ||||| || |||||||||||| ||| || | ||| ||| ||| |||||||| Sbjct 300369 AGCGGGCGGTGGGACTGGGACAGCCTGAAGGAGAAGGTGATGCAGGTCGGCATGCGCAAC 300428 Query 262930 TCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATCCTGGGCAACACCGAG 262989 || |||| |||||| ||||| || ||| |||||||||||||||||||||||| |||| Sbjct 300429 TCCCTGCTGCTGGCGCCGATGCCAACCGCCTCGACGTCGCAGATCCTGGGCAACAACGAG 300488 Query 262990 GCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTCTCGGGCGACTTTACC 263049 |||||| | |||| |||||||||| || || || || ||||| || | Sbjct 300489 TGCTTCGAGCCCTTCACCTCCAACATCTACGTCCGTCGTGTCCTGAGCGGCGAGTTCCCT 300548 Query 263050 GTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTGTGGACGCCCGAC-TT 263108 ||||| ||| |||| || | | | | | |||||| ||||||| | ||| | Sbjct 300549 GTGGTGAACAAGTACCTCGTGATGGACCTCATCAAGCGCGGACTGTGGA-ACGAGACGAT 300607 Query 263109 TCGCGACCGGCTCAT-TGCGGCACAGGGCTCGGTGCAGGGCTTTGACGACGAGGAGGTGC 263167 ||| || | |||| | | || | || || || | | | | ||| || | | | Sbjct 300608 GCGCAACGAGATCATCTCCTACA-ACGGGTCCGTTCTGTCCATCGAC----AGCA--TCC 300660 Query 263168 CGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGAGGTGCCCAACCGGGTGACCATTG 263227 | || || |||| || | | |||||||||||| | || | || | || | Sbjct 300661 CTGATGACCTGAAGGAGCTATACCGCACCGTGTGGGAGATCCCGCAGCGCAAGCTGATCG 300720 Query 263228 ATATGGCGGCCGACCGCGCGCCCTATGTCGACCAGAGCCAGTCGCTCAACCTGTACCTCG 263287 | ||||| || |||| | || | |||||| |||||||| ||||| | | | Sbjct 300721 ACATGGCACGTGATCGCGGCCAGTACATTGACCAGTCGCAGTCGCTAAACCTCT-TTTTG 300779 Query 263288 CCGA-CCCGACGGCCGAGAGCATCACGTCGATGCACGCCTATGCGTGGCGTCGCGGCCTC 263346 | || ||| || | | | ||||||||||||| | ||| | ||| |||| ||| Sbjct 300780 CAGAGCCCCTCGTCGGGGCAGATCACGTCGATGCTCTTCTACACCTGGGAGTGCGGGCTC 300839 Query 263347 AAGACTGGCATGTACTATCTGCGCACCCGGCCCGCTGCCAACGCCATTCAATTCACCGTC 263406 |||||||| ||||||| ||||||||| | |||||||| ||||||| | |||||||| Sbjct 300840 AAGACTGGTGTGTACTACCTGCGCACCAAGGCCGCTGCCGACGCCATCAAGTTCACCGTG 300899 Query 263407 GAT 263409 ||| Sbjct 300900 GAT 300902 Score = 96.9 bits (106), Expect = 5e-14 Identities = 126/172 (73%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 262097 TGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGAC 262156 |||| ||||| ||| | | || |||||||| ||| ||||| ||| ||||||||||| Sbjct 299802 TGGTTCGCCATCCTCGAGTCGCAGATCGAGACAGGCGTGCCCTTCATCCTCTACAAGGAC 299861 Query 262157 GCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGCC-AACCTGTG 262215 || |||| | |||||| ||||||| ||||||| | || | | |||||||| Sbjct 299862 GCGTGCAACAGCAAGTCGAACCAGAAGAACCTCGGCACCATCA-AGTGCTCGAACCTGTG 299920 Query 262216 CACCGAGATCGTCCAGTTTTCGTCGCCCACCGAGGCAAGTGTGTGCAACCTC 262267 ||||||||||||| |||| ||||||| ||| | |||||||||||| Sbjct 299921 CACCGAGATCGTCGAGTTCACGTCGCCGGAGGAGACGGCGGTGTGCAACCTC 299972 >seq10 Length=920654 Score = 127 bits (140), Expect = 3e-23 Identities = 353/523 (67%), Gaps = 15/523 (3%) Strand=Plus/Plus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 ||||||||| || | || | ||||| ||| ||||||||||| |||||| || Sbjct 12584 CTCCATCTCACCGACACGCAGCCCGCCACTGCGGGAGCGGCCCTCCGTTGGCTGCCGCGT 12643 Query 1600318 GAGCATCTGGACGGGGCCGCGTGG-TCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCA 1600376 |||||| | || || | |||| |||||||| |||||||| | ||| ||| || Sbjct 12644 CAGCATC-GAGCGAGGGCCAGTGGAGCGGGCGTGCATCTTGTCCGTCACCATGTGCTTCA 12702 Query 1600377 GGGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGCCTCCATGGGCTCGCCGGTG-TG 1600434 | ||||||||||| ||| |||| | |||| | ||| |||| |||||||||| || Sbjct 12703 GCCGCTGGTAGTAGATCGG-GCCGAAGAAGACGTAGCCCTGCATGAACTCGCCGGTGATG 12761 Query 1600435 CGGGTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCCG-TGGCGAGCCAACTCGGCGG 1600493 | | ||||| | |||||||||| | | | | ||| || ||| || || ||||| Sbjct 12762 CCCG-AGTAGAAGGCGTCCTTGCCGTGGTAGTTGTAGCCGAAGGAGAG-CAGCT-GGCGG 12818 Query 1600494 C-GACATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGCGG 1600552 | || |||| | | | | || || |||| |||||||||||||| |||| | | | Sbjct 12819 CTGATGCTGTCGGCCGAGTCACCACCGAAGGCCGTGCCGTCGCCCATCGAGCCTTTGAGC 12878 Query 1600553 CAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGATG 1600612 || ||||| || | |||||||| |||||||| |||||||| ||| | | Sbjct 12879 GCCGCTGCCTTGGAGCAGACGAGCTCCATCAGCTTGCCCACCGTCATGCGGCTCGGAAAG 12938 Query 1600613 GCGTGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCC 1600672 ||||||| || || | || || || | ||| ||| | || ||||||||||| Sbjct 12939 CCGTGCGGATTCATGATCATATCCGGGCTCATGCCG-CGCTCGTTGA--AGGGCATGTCC 12995 Query 1600673 TCGGTG-GAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACAGTTTGTC 1600731 || | ||| | | ||| || ||||| || |||||||| || || | ||||| Sbjct 12996 ACGCCGTTCGCG-ATGAGGCCGACTACACCCTTCTGCCCGTGGCGGGAGGAGAACTTGTC 13054 Query 1600732 GCCCACCTCGGGCTGGCGCATGGCCCGCGTGACGATCTTGACC 1600774 |||| ||| ||| | |||| | |||||||||| || ||| Sbjct 13055 GCCCGGCTCAGGCGGCCGCACCTCGCGCGTGACGACTTTCACC 13097 >seq20 Length=1996037 Score = 107 bits (118), Expect = 3e-17 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 1818084 ACGCGCTCGGGAAAGGTGAGCGTCTTGACGATCTCATAGGGCACGCCCACCTCGTCAATG 1818143 || ||||| || |||||||||||| || ||| |||||||||| |||||||| | | Sbjct 1731648 ACCCGCTCCGGGAAGGTGAGCGTCATGGCGACGGAGAAGGGCACGCCGACCTCGTCGACG 1731707 Query 1818144 TCAATCTCGGGGTCGGGGCTGATGACGGCGCGCGCGGTAAAGTTGACGCGCTTGCCCATG 1818203 || || | ||||||| | |||| || | ||| |||| |||| ||||||||||||||| Sbjct 1731708 TCGATGTTGGGGTCGCCGGTGATCACAGTGCGGGCGGAGAAGTCGACGCGCTTGCCCATC 1731767 Query 1818204 CAATTGCCGCGGATCCTGCCCTCCTTGCCCTTGAACCGCTCC 1818245 ||||| || | | ||| ||||||||||| |||||| Sbjct 1731768 AGGTTGCCCCGCACGCGGCCGAACTTGCCCTTGAGGCGCTCC 1731809 Score = 102 bits (112), Expect = 1e-15 Identities = 130/174 (75%), Gaps = 4/174 (2%) Strand=Plus/Plus Query 1601274 GCACCAGCGGCACCTGCGGGTAGCACAGGGCGTGCGACACCGTGTCGATG-GCATGGTCG 1601332 ||||||||||| |||||||||| | ||| |||| | ||||| ||| ||||| | | Sbjct 65941 GCACCAGCGGCTTCTGCGGGTAGAAGAGGACGTGGGCGGTGGTGTCCATGCGCATG-TGG 65999 Query 1601333 GCGTTGAGCGACACGACGGCCT-TGCTCTGCTTGCCCATGGCCGTCTGGTAGATGTTGCG 1601391 |||| | | || | || || ||||||||||||||| | ||||||| ||||||| Sbjct 66000 AAGTTG-GAGGCATAAATACCCATGGCCTGCTTGCCCATGGCGGACTGGTAGGTGTTGCG 66058 Query 1601392 CGGCGCCTGGTTGTGGTTGGAAAACGGGATGATGGACGCGCAGGCGCCCAGCAT 1601445 || | |||||||||||| | | ||||||||||| |||||| |||||| || Sbjct 66059 TGGGGACTGGTTGTGGTTCGGGTAGGGGATGATGGAGGCGCAGATGCCCAGGAT 66112 Score = 87.8 bits (96), Expect = 3e-11 Identities = 303/463 (65%), Gaps = 11/463 (2%) Strand=Plus/Plus Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317 ||||||||| || | ||| | |||||| | | | || ||||| |||||| Sbjct 64955 CTCCATCTCGCCGAAGCGCAGACCGCCCTCGTGGGCACGCCCCTCCGTCGGCTGACGCAC 65014 Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377 ||| ||| | || || || || |||||||| |||||||| | || ||| ||| Sbjct 65015 GAGTGGCTGCAGAGGCCCACGCGGCCGGGCGTGGATCTTGTCACCTGACAAGTGCTTCAG 65074 Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTA-AAGATCAACGCCTCCATGGGCTCGCCGGTGTGCG 1600436 |||||| || ||| ||| | ||||| | || | ||| || ||||| Sbjct 65075 CCGTTGGTAGAAGGTGGGC-CCGAAGAAGATGAGGTGGTCGAGGGGGAGCCCCGTGTGTC 65133 Query 1600437 GGTGGTAGAGCACCTCCTTGCCGTAGCGCT-CGCATCCGTGGCGAGCCAACTCGGCGGCG 1600495 || |||||| ||| |||||||| |||| || | |||| || | | | | | Sbjct 65134 CGTTGTAGAGGCACTCGTTGCCGTACCGCTGCGACTTGAGGGCGTGC-AGCGCCTTGCCA 65192 Query 1600496 ACATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCGCGGCAG 1600555 | ||||| ||| ||| || ||||||||| | | || | ||||| | ||| Sbjct 65193 AAGTCGTCCACGACAACGGAGCAGAAGGGCGTGGCATACACCTCGCCGCCCTTGTAACAG 65252 Query 1600556 GCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGGATGGCG 1600615 ||||||||||| ||||| ||| || | | | ||| |||||||| || || |||||| Sbjct 65253 GCCACCTTGCCGGCGAGGGTCTCGATGAGGTGGGCCACCGTCATGCGGGAGGGAATGGCG 65312 Query 1600616 TGCGGGTTGATCACAATGTCGGGCGTGGCACCGCCGCGAGGCGACCAGGGCATGTCCTC- 1600674 || |||||||| | | ||| ||| | | ||| |||| | || ||||||||||||| Sbjct 65313 TGGGGGTTGATAATTAAGTCCGGCACGACGCCGTCGCG-GTTGA--AGGGCATGTCCTCC 65369 Query 1600675 -GGTGGAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCG 1600716 || ||| | | |||| |||||||| || |||||||| Sbjct 65370 TGGCGGAACTGA--ATGCCGTTCGTGCCCTTCTGCCCGTGGCG 65410 >seq26 Length=613868 Score = 91.5 bits (100), Expect = 2e-12 Identities = 126/169 (75%), Gaps = 8/169 (5%) Strand=Plus/Minus Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG-GTCGCC 725034 |||||||||||||| ||||||||| |||| || ||||||| || ||||| | |||| Sbjct 554131 GATCATGAACTCGTACGTCAACGACGTGATGGAGCGCATCGCGACGGAGGCTGCGTCGAT 554072 Query 725035 TG-GCGCGC-TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 || |||||| ||| ||||| ||| | || | |||||||| ||||| |||||||| Sbjct 554071 TGTGCGCGCGAACAAGAAGCG---CACCCTGGGTGCCCGCGAGATGCAGACGGCCGTGCG 554015 Query 725093 CCTGATCATGCGCGGC-GAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | | | ||| |||| || ||||| | |||||| | | |||||||| Sbjct 554014 CATTGTGCTGC-CGGCTGAGCTGGCGAAGCACGCGATGGCGGAGGGCAC 553967 >seq9 Length=823452 Score = 89.7 bits (98), Expect = 7e-12 Identities = 123/167 (74%), Gaps = 4/167 (2%) Strand=Plus/Minus Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG-GTCGCC 725034 |||||||||||||| ||||||||| |||| || ||||||| || ||||| | |||| Sbjct 24992 GATCATGAACTCGTACGTCAACGACGTGATGGAGCGCATCGCGACGGAGGCTGCGTCG-A 24934 Query 725035 TGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCC 725094 | | |||| | |||||| ||| | || | |||||||| ||||| ||||||||| Sbjct 24933 TCGTGCGCGCGAACAAGAAGCGCACCCTGGGTGCCCGCGAGATGCAGACGGCCGTGCGCA 24874 Query 725095 TGATCATGCGCGGC-GAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | | ||| |||| || ||||| | |||||| | | |||||||| Sbjct 24873 TCGTGCTGC-CGGCTGAGCTGGCGAAGCACGCGATGGCGGAGGGCAC 24828 Score = 87.8 bits (96), Expect = 3e-11 Identities = 125/169 (74%), Gaps = 8/169 (5%) Strand=Plus/Minus Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG-GTCGCC 725034 |||||||||||||| ||||||||| |||| || ||||||| || ||||| | ||| Sbjct 25926 GATCATGAACTCGTACGTCAACGACGTGATGGAGCGCATCGCGACGGAGGCTGCCTCGAT 25867 Query 725035 TG-GCGCGC-TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 || |||||| ||| ||||| ||| | || | |||||||| ||||| |||||||| Sbjct 25866 TGTGCGCGCGAACAAGAAGCG---CACCCTGGGTGCCCGCGAGATGCAGACGGCCGTGCG 25810 Query 725093 CCTGATCATGCGCGGC-GAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | | | ||| |||| || ||||| | |||||| | | |||||||| Sbjct 25809 CATCGTGCTGC-CGGCTGAGCTGGCGAAGCACGCGATGGCGGAGGGCAC 25762 >seq244 Length=18220 Score = 87.8 bits (96), Expect = 3e-11 Identities = 125/169 (74%), Gaps = 8/169 (5%) Strand=Plus/Plus Query 724976 GATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCG-GTCGCC 725034 |||||||||||||| ||||||||| |||| || ||||||| || ||||| | ||| Sbjct 765 GATCATGAACTCGTACGTCAACGACGTGATGGAGCGCATCGCGACGGAGGCTGCCTCGAT 824 Query 725035 TG-GCGCGC-TCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCG 725092 || |||||| ||| ||||| ||| | || | |||||||| ||||| |||||||| Sbjct 825 TGTGCGCGCGAACAAGAAGCG---CACCCTGGGTGCCCGCGAGATGCAGACGGCCGTGCG 881 Query 725093 CCTGATCATGCGCGGC-GAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 | | | ||| |||| || ||||| | |||||| | | |||||||| Sbjct 882 CATCGTGCTGC-CGGCTGAGCTGGCGAAGCACGCGATGGCGGAGGGCAC 929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177767025058196