Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20fasciculata_20[genbank_20GCA_5F000331325.2_202015-08-20] 458 sequences; 41,297,378 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq20 98.7 8e-16 >seq20 Length=1996037 Score = 98.7 bits (108), Expect = 8e-16 Identities = 112/146 (77%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 53531 ATGGGCGACAAGTT-TGCATCCTTCACGGCGCAAAAGGGGACATGCGGAG--CGGTCCTG 53587 || ||||||||||| |||| || ||||| ||| ||||| || ||| | || | | Sbjct 65431 ATCGGCGACAAGTTCTGCAGCCGCCACGG-GCAGAAGGGCACGAACGGCATTCAGTTCCG 65373 Query 53588 ACTCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCC 53647 | ||||||||||||||||| || ||||| || ||||| ||| | || ||||||||| Sbjct 65372 CC--AGGAGGACATGCCCTTCAACCGCGACGGCGTCGTGCCGGACTTAATTATCAACCCC 65315 Query 53648 CACGCCTTTCCCTCCAGGATGACGGT 53673 |||||| |||||||| | |||||||| Sbjct 65314 CACGCCATTCCCTCCCGCATGACGGT 65289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406160932847788