Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value SEQ14679 208 9e-49 SEQ11513 208 9e-49 SEQ10795 208 9e-49 SEQ10794 208 9e-49 >SEQ14679 Length=18604 Score = 208 bits (230), Expect = 9e-49 Identities = 430/630 (68%), Gaps = 25/630 (4%) Strand=Plus/Minus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| ||||||| | |||||||||||| |||||||||||||||| || ||| ||| Sbjct 16101 CAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGTG 16042 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 | | ||||| || || || || | |||| || | |||||||| ||||| Sbjct 16041 CACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGTA 15982 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 || |||||||| |||||||| || |||||||| | |||||||||||||||| ||| Sbjct 15981 CGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGGTACAGCATGCA 15922 Query 145851 GGAGAGCTC---CCCGCCCG---CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904 ||| | ||| | | ||| ||||||||||||| || |||||||| || || || Sbjct 15921 GGACAACTCCTTCGTGTCCGTGTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGAGGGAG 15862 Query 145905 GGCCATGGCGGGCAGGTCCGC-CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCG 145962 |||||| ||| || ||| ||||||||| || |||| || |||| | | || | Sbjct 15861 GGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGTTC 15804 Query 145963 GGGTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGG 146019 ||||| |||||| |||| | || | | ||| ||||||||||||| || | Sbjct 15803 GGGTTTGTCTTGAGGGTCTCGACAAT---TTGCTTGATTTGGTCCACGCCCTCGCCGTCG 15747 Query 146020 TAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACG 146079 || | | | || || |||| | || |||||||| | ||||||||| |||||||| Sbjct 15746 TAGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACA 15687 Query 146080 GGCCCCAGGTCCCCGGGCTCCCTGTGCCC---CAGCCCGGCCCGGGCGAGGAAGTCCCGG 146136 || || |||||| |||| | | | | |||||| | | | ||||| || || Sbjct 15686 GGGCCGAGGTCC---ATCTCCTTATTCTCCGTCAGCCCCCGGCTGTCCAGGAACTCGCGC 15630 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || |||||| |||||||||| | | | || | | | ||| | | || ||| Sbjct 15629 GAGCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCA 15570 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 || | | ||||||| || ||| ||| || || | |||||| || | ||| || ||| Sbjct 15569 CCACGCAAAAACCAGATCAACTCCTCGCACACGCCACGCCAGAAAACGCGCTTCGTCGTC 15510 Query 146257 AGCAGGGGGAACTGG---CCCCGCAGGGAG 146283 ||||| || | || | | ||||||||| Sbjct 15509 AGCAGAGGCAGCTTGTTATCGCGCAGGGAG 15480 >SEQ11513 Length=10065 Score = 208 bits (230), Expect = 9e-49 Identities = 430/630 (68%), Gaps = 25/630 (4%) Strand=Plus/Plus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| ||||||| | |||||||||||| |||||||||||||||| || ||| ||| Sbjct 8450 CAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGTG 8509 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 | | ||||| || || || || | |||| || | |||||||| ||||| Sbjct 8510 CACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGTA 8569 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 || |||||||| |||||||| || |||||||| | |||||||||||||||| ||| Sbjct 8570 CGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGGTACAGCATGCA 8629 Query 145851 GGAGAGCTC---CCCGCCCG---CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904 ||| | ||| | | ||| ||||||||||||| || |||||||| || || || Sbjct 8630 GGACAACTCCTTCGTGTCCGTGTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGAGGGAG 8689 Query 145905 GGCCATGGCGGGCAGGTCCGC-CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCG 145962 |||||| ||| || ||| ||||||||| || |||| || |||| | | || | Sbjct 8690 GGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGTTC 8747 Query 145963 GGGTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGG 146019 ||||| |||||| |||| | || | | ||| ||||||||||||| || | Sbjct 8748 GGGTTTGTCTTGAGGGTCTCGACAAT---TTGCTTGATTTGGTCCACGCCCTCGCCGTCG 8804 Query 146020 TAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACG 146079 || | | | || || |||| | || |||||||| | ||||||||| |||||||| Sbjct 8805 TAGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACA 8864 Query 146080 GGCCCCAGGTCCCCGGGCTCCCTGTGCCC---CAGCCCGGCCCGGGCGAGGAAGTCCCGG 146136 || || |||||| |||| | | | | |||||| | | | ||||| || || Sbjct 8865 GGGCCGAGGTCC---ATCTCCTTATTCTCCGTCAGCCCCCGGCTGTCCAGGAACTCGCGC 8921 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || |||||| |||||||||| | | | || | | | ||| | | || ||| Sbjct 8922 GAGCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCA 8981 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 || | | ||||||| || ||| ||| || || | |||||| || | ||| || ||| Sbjct 8982 CCACGCAAAAACCAGATCAACTCCTCGCACACGCCACGCCAGAAAACGCGCTTCGTCGTC 9041 Query 146257 AGCAGGGGGAACTGG---CCCCGCAGGGAG 146283 ||||| || | || | | ||||||||| Sbjct 9042 AGCAGAGGCAGCTTGTTATCGCGCAGGGAG 9071 >SEQ10795 Length=18609 Score = 208 bits (230), Expect = 9e-49 Identities = 430/630 (68%), Gaps = 25/630 (4%) Strand=Plus/Plus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| ||||||| | |||||||||||| |||||||||||||||| || ||| ||| Sbjct 2504 CAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGTG 2563 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 | | ||||| || || || || | |||| || | |||||||| ||||| Sbjct 2564 CACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGTA 2623 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 || |||||||| |||||||| || |||||||| | |||||||||||||||| ||| Sbjct 2624 CGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGGTACAGCATGCA 2683 Query 145851 GGAGAGCTC---CCCGCCCG---CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904 ||| | ||| | | ||| ||||||||||||| || |||||||| || || || Sbjct 2684 GGACAACTCCTTCGTGTCCGTGTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGAGGGAG 2743 Query 145905 GGCCATGGCGGGCAGGTCCGC-CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCG 145962 |||||| ||| || ||| ||||||||| || |||| || |||| | | || | Sbjct 2744 GGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGTTC 2801 Query 145963 GGGTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGG 146019 ||||| |||||| |||| | || | | ||| ||||||||||||| || | Sbjct 2802 GGGTTTGTCTTGAGGGTCTCGACAAT---TTGCTTGATTTGGTCCACGCCCTCGCCGTCG 2858 Query 146020 TAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACG 146079 || | | | || || |||| | || |||||||| | ||||||||| |||||||| Sbjct 2859 TAGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACA 2918 Query 146080 GGCCCCAGGTCCCCGGGCTCCCTGTGCCC---CAGCCCGGCCCGGGCGAGGAAGTCCCGG 146136 || || |||||| |||| | | | | |||||| | | | ||||| || || Sbjct 2919 GGGCCGAGGTCC---ATCTCCTTATTCTCCGTCAGCCCCCGGCTGTCCAGGAACTCGCGC 2975 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || |||||| |||||||||| | | | || | | | ||| | | || ||| Sbjct 2976 GAGCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCA 3035 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 || | | ||||||| || ||| ||| || || | |||||| || | ||| || ||| Sbjct 3036 CCACGCAAAAACCAGATCAACTCCTCGCACACGCCACGCCAGAAAACGCGCTTCGTCGTC 3095 Query 146257 AGCAGGGGGAACTGG---CCCCGCAGGGAG 146283 ||||| || | || | | ||||||||| Sbjct 3096 AGCAGAGGCAGCTTGTTATCGCGCAGGGAG 3125 >SEQ10794 Length=10062 Score = 208 bits (230), Expect = 9e-49 Identities = 430/630 (68%), Gaps = 25/630 (4%) Strand=Plus/Minus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| ||||||| | |||||||||||| |||||||||||||||| || ||| ||| Sbjct 1616 CAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGTG 1557 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 | | ||||| || || || || | |||| || | |||||||| ||||| Sbjct 1556 CACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGTA 1497 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 || |||||||| |||||||| || |||||||| | |||||||||||||||| ||| Sbjct 1496 CGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGGTACAGCATGCA 1437 Query 145851 GGAGAGCTC---CCCGCCCG---CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904 ||| | ||| | | ||| ||||||||||||| || |||||||| || || || Sbjct 1436 GGACAACTCCTTCGTGTCCGTGTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGAGGGAG 1377 Query 145905 GGCCATGGCGGGCAGGTCCGC-CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCG 145962 |||||| ||| || ||| ||||||||| || |||| || |||| | | || | Sbjct 1376 GGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGTTC 1319 Query 145963 GGGTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGG 146019 ||||| |||||| |||| | || | | ||| ||||||||||||| || | Sbjct 1318 GGGTTTGTCTTGAGGGTCTCGACAAT---TTGCTTGATTTGGTCCACGCCCTCGCCGTCG 1262 Query 146020 TAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACG 146079 || | | | || || |||| | || |||||||| | ||||||||| |||||||| Sbjct 1261 TAGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACA 1202 Query 146080 GGCCCCAGGTCCCCGGGCTCCCTGTGCCC---CAGCCCGGCCCGGGCGAGGAAGTCCCGG 146136 || || |||||| |||| | | | | |||||| | | | ||||| || || Sbjct 1201 GGGCCGAGGTCC---ATCTCCTTATTCTCCGTCAGCCCCCGGCTGTCCAGGAACTCGCGC 1145 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || |||||| |||||||||| | | | || | | | ||| | | || ||| Sbjct 1144 GAGCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCA 1085 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 || | | ||||||| || ||| ||| || || | |||||| || | ||| || ||| Sbjct 1084 CCACGCAAAAACCAGATCAACTCCTCGCACACGCCACGCCAGAAAACGCGCTTCGTCGTC 1025 Query 146257 AGCAGGGGGAACTGG---CCCCGCAGGGAG 146283 ||||| || | || | | ||||||||| Sbjct 1024 AGCAGAGGCAGCTTGTTATCGCGCAGGGAG 995 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589965917193320