Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value SEQ12144 82.4 5e-11 SEQ10630 82.4 5e-11 SEQ10629 82.4 5e-11 >SEQ12144 Length=2121 Score = 82.4 bits (90), Expect = 5e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 33577 ATGGGCGACAAGTT-TGCATCGTTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGA 33635 || || |||||||| |||| | ||||| | |||||||||| ||| || || | Sbjct 1338 ATCGGTGACAAGTTCTGCAGCCGGCACGGGC-AGAAGGGCACCAACGGTATTCAGTTCCG 1280 Query 33636 CCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCA 33695 ||| ||||||||| |||| |||||||||||| || ||||| ||||||||||||| Sbjct 1279 TCAGGAGGACATGCCTTTCAACCGCGACGGCGTGGTGCCCGACCTCATCATCAACCCGCA 1220 Query 33696 TGCGTTCCCCTCGCGCATGACGGT 33719 || | || || || |||||||| Sbjct 1219 CGCCATTCCTTCCCGTATGACGGT 1196 >SEQ10630 Length=2617 Score = 82.4 bits (90), Expect = 5e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 33577 ATGGGCGACAAGTT-TGCATCGTTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGA 33635 || || |||||||| |||| | ||||| | |||||||||| ||| || || | Sbjct 784 ATCGGTGACAAGTTCTGCAGCCGGCACGGGC-AGAAGGGCACCAACGGTATTCAGTTCCG 842 Query 33636 CCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCA 33695 ||| ||||||||| |||| |||||||||||| || ||||| ||||||||||||| Sbjct 843 TCAGGAGGACATGCCTTTCAACCGCGACGGCGTGGTGCCCGACCTCATCATCAACCCGCA 902 Query 33696 TGCGTTCCCCTCGCGCATGACGGT 33719 || | || || || |||||||| Sbjct 903 CGCCATTCCTTCCCGTATGACGGT 926 >SEQ10629 Length=1811 Score = 82.4 bits (90), Expect = 5e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 33577 ATGGGCGACAAGTT-TGCATCGTTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGA 33635 || || |||||||| |||| | ||||| | |||||||||| ||| || || | Sbjct 707 ATCGGTGACAAGTTCTGCAGCCGGCACGGGC-AGAAGGGCACCAACGGTATTCAGTTCCG 649 Query 33636 CCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCA 33695 ||| ||||||||| |||| |||||||||||| || ||||| ||||||||||||| Sbjct 648 TCAGGAGGACATGCCTTTCAACCGCGACGGCGTGGTGCCCGACCTCATCATCAACCCGCA 589 Query 33696 TGCGTTCCCCTCGCGCATGACGGT 33719 || | || || || |||||||| Sbjct 588 CGCCATTCCTTCCCGTATGACGGT 565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356168332772299