Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq9113 84.2 2e-11 >seq9113 Length=16536 Score = 84.2 bits (92), Expect = 2e-11 Identities = 219/331 (66%), Gaps = 5/331 (2%) Strand=Plus/Minus Query 157481 ATGTCGCAATGCCACGGTTCAACGTACACTGCTTGGGCTCCTTTTCGCTT---GCCACCT 157537 |||||| |||||||| || | ||| | || ||| || || ||||| ||| || Sbjct 5817 ATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTTGCGCTTACCGCCGCCC 5758 Query 157538 TGATCCACGTGACGCACCATATTATTAAAAACTCGCAGCATTGGTAGCAGTCCGCTGGCG 157597 || ||||||| || || | || || || || |||||||| || | ||| ||| | | Sbjct 5757 TGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGGCACCAGGCCGTTCGAC 5698 Query 157598 GTGCCGTTCGTAGATTTTATTTTGCTGTTGCGGCCGCGTACGCTGTTCACGTTCAATCCA 157657 ||||||||||| || | |||| | | ||| | | ||| ||||| || || Sbjct 5697 GTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTTGTGCACGTGCAGGCCG 5638 Query 157658 ATACCGCCGCCGTGTTTAGAGATCATGGCGCAATCGTTTAATGTGTTATAGATGCCGCGA 157717 || |||||| | || ||| | |||||| || || | |||| || || ||| | Sbjct 5637 ATGCCGCCGGCCGCCTTGCTGATGACGGCGCACTCCTTCAGCGTGTCGTAAATCCCGTCA 5578 Query 157718 ATGCTATCG-CTTTCCATGGTCAATAGAAAACATGAACTCATCTGCGGAGTCAGACTGCC 157776 ||||| ||| | ||| | | | || || || || ||||||||||| | | |||| Sbjct 5577 ATGCTGTCGTCCTTCGA-CGCGACGAGGAAGCACGAGCTCATCTGCGGCTTTGGTGTGCC 5519 Query 157777 GGCAGCGAACATGGTTGGGCTTGCGTGCGTG 157807 ||| ||| | ||| ||| | ||||||||| Sbjct 5518 GGCGTTGAAGAGGGTCGGGGTGGCGTGCGTG 5488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 506919125656560