Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11]
15,033 sequences; 67,441,112 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq8796 145 1e-29
seq6209 129 9e-25
seq9113 109 8e-19
>seq8796
Length=7791
Score = 145 bits (160), Expect = 1e-29
Identities = 540/835 (65%), Gaps = 50/835 (6%)
Strand=Plus/Plus
Query 125055 TGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACT 125114
|||||| | || ||| |||| || ||| ||| || | || ||||||| | |||
Sbjct 6955 TGGACGCTGGAGGAGATCGACCTCGGCAACGACATGAAGGACTGGGAGAGGC---TGAAC 7011
Query 125115 GAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATC 125174
|| ||||| | || || |||| | |||| |||||||||||| ||| || |||
Sbjct 7012 GACGGGGAGCGGCACTTCATCAAGCACGTGCTGGCGTTCTTTGCCGGCAGCGACGGCATC 7071
Query 125175 GTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGC 125234
|| | || || ||| | || ||| || ||| | || |||| | || ||
Sbjct 7072 GTGATTGAGAACCTGGCGCAGCGCTTCATGAGCGACGTGAAGGTGCCGGAGGCG-CGCGC 7130
Query 125235 TTT-TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293
|| ||||| ||||| | ||||| |||||| | |||||||| | |||||| ||| |
Sbjct 7131 GTTCTACGGGTTCCAGCTGATGATGGAGAACATCCACTCGGAGACGTACTCGGTGCTGCT 7190
Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGACACGG 125352
|||| |||||| | || | || | | || | ||| | |||| ||| | |||
Sbjct 7191 GGACACGTACAT-CACGGACAGCGAGGAGAAGCTGCGGCTGCTGCACGCGATCCAGACGA 7249
Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT-CT 125411
| |||| || | || ||||| | |||| | |||||||||| || | | ||
Sbjct 7250 TCCCGTGCATCCAGAAGAAGGCGGAGTGGGCTGTGCGGTGGATCGGGAGCGGCGCGAGCT 7309
Query 125412 TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAG 125470
|| || | ||| | | ||||| || || |||||||||||||| ||||| | |
Sbjct 7310 TCCAG----GAGCGGCTGATCGGGTTCGCGGCGGTGGAGGGCATCTTCTTCTCGGGGTCG 7365
Query 125471 TTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAA 125530
|| |||| | | || ||||| ||||||||||| || ||||| || |||||| ||| ||
Sbjct 7366 TTCTGCGCGC-TGTTCTGGCTGAAGAAGCGCGGGCTGATGCCTGGGCTGACGTTCAGCAA 7424
Query 125531 CGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT----TTC 125586
|||| | || || || |||||||| || ||| ||||| || || |||| ||
Sbjct 7425 CGAGCTGATCTCGCGCGACGAGGGGCTGCACACGGACTTCGCGTGCCTGCTGTACAACTC 7484
Query 125587 GCA--------ACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACAT 125638
||| || | |||| | |||| || | | || || |||||
Sbjct 7485 GCACATCAAGCACAAGCTGCCGCGCGAGCGC-------GTGCTG--GAGATCATC----- 7530
Query 125639 TGTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCAT 125698
|| || || |||| || || | ||||| | ||| | || ||||| | |
Sbjct 7531 -GT---GGACGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGGTGCGGCT 7586
Query 125699 GATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACT 125758
||| ||||||||| |||| |||| ||||||| ||||| || || || || || ||
Sbjct 7587 GATCGGCATGAACGCGGAGCTGATGTCGCAGTACATCGAGTTCGTTGCGGACCGGCTGCT 7646
Query 125759 GTACGAGTTGATTGGCC---GCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGAC 125815
| | || | | || | ||| ||||||| | | | ||||| || ||||||
Sbjct 7647 G---GTGTCGCTGGGGCTGGAGAAGCACTACAACGTGACGCAGCCCTTCGACTTCATGGA 7703
Query 125816 CAGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
| || || || |||| ||||| ||||| |||||||||||||| ||||||||
Sbjct 7704 GATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGAAGGTTGGCGAGTAC 7758
>seq6209
Length=3470
Score = 129 bits (142), Expect = 9e-25
Identities = 426/654 (65%), Gaps = 45/654 (7%)
Strand=Plus/Plus
Query 125235 TTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATT 125294
|| ||||| ||||| | ||||| |||||| | |||||||| | |||||| ||| |
Sbjct 30 TTCTACGGGTTCCAGCTGATGATGGAGAACATCCACTCGGAGACGTACTCGGTGCTGCTG 89
Query 125295 GACATGTACATTCGCGATCCGCAACGTAAA-CACATGCTCTTTAACGCAATCGACACGGT 125353
|||| |||||| | || | || | | || | ||| | |||| ||| | ||| |
Sbjct 90 GACACGTACAT-CACGGACAGCGAGGAGAAGCTGCGGCTGCTGCACGCGATCCAGACGAT 148
Query 125354 GCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGT-CTT 125412
|||| || | || ||||| | |||| | |||||||||| || | | |||
Sbjct 149 CCCGTGCATCCAGAAGAAGGCGGAGTGGGCTGTGCGGTGGATCGGGAGCGGCGCGAGCTT 208
Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGG-TAGT 125471
| || | ||| | | ||||| || || |||||||||||||| ||||| | ||
Sbjct 209 CCAG----GAGCGGCTGATCGGGTTCGCGGCGGTGGAGGGCATCTTCTTCTCGGGGTCGT 264
Query 125472 TTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAAC 125531
| |||| | | || ||||| ||||||||||| || ||||| || |||||| ||| |||
Sbjct 265 TCTGCGCGC-TGTTCTGGCTGAAGAAGCGCGGGCTGATGCCTGGGCTGACGTTCAGCAAC 323
Query 125532 GAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGT----TTCG 125587
||| | || || || |||||||| || ||| ||||| || || |||| |||
Sbjct 324 GAGCTGATCTCGCGCGACGAGGGGCTGCACACGGACTTCGCGTGCCTGCTGTACAACTCG 383
Query 125588 CA--------ACTATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATT 125639
|| || | |||| | |||| || | | || || |||||
Sbjct 384 CACATCAAGCACAAGCTGCCGCGCGAGCGC-------GTGCTG--GAGATCATC------ 428
Query 125640 GTAACCGATGCCGTGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATG 125699
|| || || |||| || || | ||||| | ||| | || ||||| | ||
Sbjct 429 GT---GGACGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGCCGGTGCGGCTG 485
Query 125700 ATTGGCATGAACTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTG 125759
|| ||||||||| |||| |||| ||||||| ||||| || || || || || |||
Sbjct 486 ATCGGCATGAACGCGGAGCTGATGTCGCAGTACATCGAGTTCGTTGCGGACCGGCTGCTG 545
Query 125760 TACGAGTTGATTGGCC---GCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACC 125816
| || | | || | ||| ||||||| | | | ||||| || ||||||
Sbjct 546 ---GTGTCGCTGGGGCTGGAGAAGCACTACAACGTGACGCAGCCCTTCGACTTCATGGAG 602
Query 125817 AGCATATCACTAGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
| || || || |||| ||||| ||||| |||||||||||||| ||||||||
Sbjct 603 ATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAGAAGGTTGGCGAGTAC 656
>seq9113
Length=16536
Score = 109 bits (120), Expect = 8e-19
Identities = 355/545 (65%), Gaps = 10/545 (2%)
Strand=Plus/Plus
Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866
|| ||||||| | | ||||| ||||| ||||| | ||| ||| | | | ||
Sbjct 5687 ACGAACGGCACGTCGAACGGCCTGGTGCCGATGCTGCGCGTGTTCAACAACACGGCCCGC 5746
Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926
||||| ||||||||| ||| || ||||| | ||| | ||| | || || |||
Sbjct 5747 TACGTGGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCATTTACCTCGAGCCGTGG 5806
Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATG---CGCAAAAACTCTGGCTTTGAAGAGGCA 96983
||||| ||| | || | ||| | | || ||||| | | ||| || ||
Sbjct 5807 CACGCCGACATCTTCGGCTTCCTGCTGCTGAAGCGCAACACC---GGCAAGGACGACCAG 5863
Query 96984 CGAGCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAAC 97043
|| || | ||| | || || || || ||| | || || |||||||||||||||| ||
Sbjct 5864 CGTGCGCGCGACCTCTTCTACGCGCTGTGGATCCCCGACCTGTTCATGAAGCGCGTGAAG 5923
Query 97044 GACGGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGG 97103
| || | |||| || ||| ||| | ||| || || || ||| ||||
Sbjct 5924 AGTGAGGGGAAGTGGACGCTGATGGACCCAAGCACGTGCCCGGGCCTCAGCGACTGCTAC 5983
Query 97104 GGCGAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTG-AGACG 97162
||||| ||||| ||| | ||| | ||||||| |||||||| ||| |||||
Sbjct 5984 GGCGAGGAGTTCGAGCGCCTGTATGAGCGCTACGAGGCGGAGGGCCGCGGAGTGCAGACG 6043
Query 97163 AGTCGATGCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCC 97222
| || | |||| || ||||| || || | | | ||| | ||||| || ||
Sbjct 6044 A-TCCAGGCACAGGAGGTGTGGTTTGCGATTCTCGAGTCGCAGATCGAGACCGGCGTCCC 6102
Query 97223 GTACATTCTCTACAAGGATACCGTGAATC-GCAACAGCAACCAACGCCACTTGGGCACCA 97281
|| ||| ||||||||||| | ||| | | |||| ||||| || | |||||||
Sbjct 6103 GTTCATCCTCTACAAGGACGC-GTGCAACAGCAAGTCGAACCAGAAGAACCTCGGCACCA 6161
Query 97282 TCAAGGGCTCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAG 97341
||||| |||| || || ||||| || ||||| |||||| | || ||||| ||||| || |
Sbjct 6162 TCAAGTGCTCGAACCTCTGCACCGAGATTGTGGAGTACACGTCGCCGGAGGAGACCGCGG 6221
Query 97342 TTTGC 97346
| |||
Sbjct 6222 TGTGC 6226
Score = 84.2 bits (92), Expect = 3e-11
Identities = 217/323 (67%), Gaps = 6/323 (2%)
Strand=Plus/Plus
Query 97950 CTGTGGAACGATGAC-ATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACAT 98008
|||||||| || ||| ||| | | |||||| | | |||| || ||| | | | |||
Sbjct 6851 CTGTGGAATGA-GACGATGCGCAACGAGATCATCTCCTACAACGGCTCCGTGCTGACCAT 6909
Query 98009 TACCATCATCCCGGAAGAGTTGC-GCAGAATCTACAAGACTGTCTGGGAGATTCCGACCA 98067
|| ||||||||| || || | || | ||| || || |||||||| |||
Sbjct 6910 CGACAGCATCCCGGACGACCTGAAGGAGC-TGTACCGCACGGTGTGGGAGATCCCGCAGC 6968
Query 98068 AGACGCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCA 98127
| ||||||||| ||||| |||| | || |||||||||||| || ||| | |
Sbjct 6969 GCAAGCTGATCGACATGGCCCGCGACCGCGGCCAGTACATTGACCAGTCCCAGTCGCTGA 7028
Query 98128 ATCTGTACGTTGCCGAG-CCCACCTACAGTCGTATGACTTCGATACACTTTTACGCATGG 98186
| || | | ||| || ||||||| | | || || ||||| | ||| ||| | |||
Sbjct 7029 ACCTCTTC-CTGCAAAGCCCCACCTCGGGCCAGATCACGTCGATGCTCTTCTACACGTGG 7087
Query 98187 AACAAGGGCCTCAAGACGGGCATGTACTATCTGAGAACAAAGTCGGCCACCAATGCCATA 98246
| ||| || |||||||| ||||||| ||| | || ||| ||||| || |||| ||
Sbjct 7088 GAGTCGGGTCTGAAGACGGGTGTGTACTACCTGCGCACGAAGGCGGCCGCCGATGCGATT 7147
Query 98247 CCATTTACGGTGGACGTGAATCG 98269
|| |||||||| | ||| ||
Sbjct 7148 AAGTTCACGGTGGATGCGAAGCG 7170
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740919945713080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |