Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq6451 87.8 2e-12 seq3668 82.4 7e-11 >seq6451 Length=1481 Score = 87.8 bits (96), Expect = 2e-12 Identities = 117/163 (72%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 23983 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCG 24042 || ||| ||||| | ||||| || || | || || || |||| || |||| |||| Sbjct 225 CAGACACCATGCAGATCTTTGTGAAGACCCTGACCGGTAAGACGATCGCCCTCGAGGTCG 166 Query 24043 AGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 |||| | ||||||||||||| | || || |||||| ||||| || ||||| || | Sbjct 165 AGGCGAGCGACACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCGC 106 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145 | || || ||| | ||||| | | ||||||||| || ||||| Sbjct 105 CGGACCAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAAGA 63 >seq3668 Length=3103 Score = 82.4 bits (90), Expect = 7e-11 Identities = 116/163 (71%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 23983 CAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCG 24042 || ||| ||||| | || || || || | || || || |||| || |||| |||| Sbjct 395 CAGACATCATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACGATCGCCCTCGAGGTCG 336 Query 24043 AGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTC 24102 |||| | ||||||||||||| | || || |||||| ||||| || ||||| || | Sbjct 335 AGGCGAGCGACACCATCGAGAACGTGAAGGCGAAGATTCAGGACAAGGAGGGCATCCCGC 276 Query 24103 CCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGA 24145 | || || ||| | ||||| | || ||||||||| || || || Sbjct 275 CGGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTGGAGGA 233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429857229410115