Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value SEQ11735 129 1e-24 SEQ11734 129 1e-24 seq8796 127 4e-24 seq6209 127 4e-24 >SEQ11735 Length=18701 Score = 129 bits (142), Expect = 1e-24 Identities = 216/312 (69%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGTGGAGCGTTCTAT 218573 ||||| | || |||||||| ||||| ||||| || | || ||||| || Sbjct 16280 GACTTTGTGGATAAGGAGCTGATTCTCTTCTCCATCGCAGACTGC----GAGCGCAGCAT 16225 Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633 || |||| | | || ||| ||||||| |||||| ||||| |||||| || ||||| Sbjct 16224 CCCGAGCGCGATTGACGGCTTCAAGCCTGGGCAGCGCAAGATTCTCTTTTCCTGCTTCAA 16165 Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693 ||| ||||| || | | || ||||| | ||| | || ||||| || || || || Sbjct 16164 GCGCAACCTCGTCAACGCGATCAAGGTGGTCCAGCTGTCCGGTTACGTCTCGGAGCACTC 16105 Query 218694 TGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTA 218753 | |||||| ||||| |||||| ||| | | ||||| ||||||||||| |||| Sbjct 16104 CGCCTACCACCACGGCGAGCAGTCGCTGGTGCAGACGATTGTGGGCATGGCACAAGACTT 16045 Query 218754 TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATT 218813 ||| ||||| |||||||| | |||| | |||||||||||||| | || || Sbjct 16044 TGTCGGCAGCAACAACATCCCTCTCCTGCGCAAGGACGGTCAGTTTGGTACGCGGCTGCA 15985 Query 218814 GGGTGGAAAGGA 218825 ||| |||||||| Sbjct 15984 GGGCGGAAAGGA 15973 >SEQ11734 Length=18705 Score = 129 bits (142), Expect = 1e-24 Identities = 216/312 (69%), Gaps = 8/312 (3%) Strand=Plus/Minus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTC----GCGGTATGATGTGGAGCGTTCTAT 218573 ||||| | || |||||||| ||||| ||||| || | || ||||| || Sbjct 16280 GACTTTGTGGATAAGGAGCTGATTCTCTTCTCCATCGCAGACTGC----GAGCGCAGCAT 16225 Query 218574 TCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAA 218633 || |||| | | || ||| ||||||| |||||| ||||| |||||| || ||||| Sbjct 16224 CCCGAGCGCGATTGACGGCTTCAAGCCTGGGCAGCGCAAGATTCTCTTTTCCTGCTTCAA 16165 Query 218634 GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTC 218693 ||| ||||| || | | || ||||| | ||| | || ||||| || || || || Sbjct 16164 GCGCAACCTCGTCAACGCGATCAAGGTGGTCCAGCTGTCCGGTTACGTCTCGGAGCACTC 16105 Query 218694 TGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTA 218753 | |||||| ||||| |||||| ||| | | ||||| ||||||||||| |||| Sbjct 16104 CGCCTACCACCACGGCGAGCAGTCGCTGGTGCAGACGATTGTGGGCATGGCACAAGACTT 16045 Query 218754 TGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCTATT 218813 ||| ||||| |||||||| | |||| | |||||||||||||| | || || Sbjct 16044 TGTCGGCAGCAACAACATCCCTCTCCTGCGCAAGGACGGTCAGTTTGGTACGCGGCTGCA 15985 Query 218814 GGGTGGAAAGGA 218825 ||| |||||||| Sbjct 15984 GGGCGGAAAGGA 15973 >seq8796 Length=7791 Score = 127 bits (140), Expect = 4e-24 Identities = 266/390 (68%), Gaps = 11/390 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| ||| ||||| | |||||||||||||||||| | || Sbjct 7739 TCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAAGGGCTGCGTC 7680 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||||| | || || | || | | ||||| || || ||||| | Sbjct 7679 ACGTTGTAGTGCTTCTCCAGCCCCAGCGACACCAGCAGCCGGTCCGCAACGAACTCGATG 7620 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| |||||| || | ||||||||| |||| || || | || || |||||| Sbjct 7619 TACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCGCGTCGCAGATG 7560 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || || ||| || || || ||| | | || || ||| | | | | |||| Sbjct 7559 AACTCGCGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCTCGCGCGGCAGC 7500 Query 251803 TTGTTCTCCAGCTTTGA---GTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTCGT 251857 |||| || | | || |||||| | || ||| || | || |||||| ||||||| Sbjct 7499 TTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTCCGT--GTGCAGCCCCTCGT 7442 Query 251858 CGCGACTGATGAACTCGTTGGACAGACC--CAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 |||| ||| | ||||||| | || | ||| |||||||||| ||| || ||| | || Sbjct 7441 CGCGCGAGATCAGCTCGTTG--CTGAACGTCAGCCCAGGCATCAGCCCGCGCTTCTTCAG 7384 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAA 251945 |||||| | ||||| || || || ||||| Sbjct 7383 CCAGAACAGCGCGCAGAACGACCCCGAGAA 7354 >seq6209 Length=3470 Score = 127 bits (140), Expect = 4e-24 Identities = 266/390 (68%), Gaps = 11/390 (3%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||||| ||| ||||| | |||||||||||||||||| | || Sbjct 637 TCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATGAAGTCGAAGGGCTGCGTC 578 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 | ||||| ||||| | || || | || | | ||||| || || ||||| | Sbjct 577 ACGTTGTAGTGCTTCTCCAGCCCCAGCGACACCAGCAGCCGGTCCGCAACGAACTCGATG 518 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| |||||| || | ||||||||| |||| || || | || || |||||| Sbjct 517 TACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCACCGGCAGCGCGTCGCAGATG 458 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAGAGACAGC 251802 || || ||| || || || ||| | | || || ||| | | | | |||| Sbjct 457 AACTCGCGCTCGATGTTCACCGCGTCCACGATGATCTCCAGCACGCGCTCGCGCGGCAGC 398 Query 251803 TTGTTCTCCAGCTTTGA---GTACAGGA-GCTCGCCAA-ACTGTTGGTGCAGACCCTCGT 251857 |||| || | | || |||||| | || ||| || | || |||||| ||||||| Sbjct 397 TTGTGCTTGATGTGCGAGTTGTACAGCAGGCACGCGAAGTCCGT--GTGCAGCCCCTCGT 340 Query 251858 CGCGACTGATGAACTCGTTGGACAGACC--CAGGCCAGGCATCACCCCACGGTTCCTGAG 251915 |||| ||| | ||||||| | || | ||| |||||||||| ||| || ||| | || Sbjct 339 CGCGCGAGATCAGCTCGTTG--CTGAACGTCAGCCCAGGCATCAGCCCGCGCTTCTTCAG 282 Query 251916 CCAGAAGATTGCGCAAAAGGATCCAGAGAA 251945 |||||| | ||||| || || || ||||| Sbjct 281 CCAGAACAGCGCGCAGAACGACCCCGAGAA 252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027638828032753