Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq9113 210 2e-49 >seq9113 Length=16536 Score = 210 bits (232), Expect = 2e-49 Identities = 503/757 (66%), Gaps = 8/757 (1%) Strand=Plus/Plus Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951 |||||||||||||| |||||||| || || || ||| |||||| ||||| ||||| Sbjct 5495 GCCACCCCGACCCTCTTCAACGCCGGCACACCAAAGCCGCAGATGAGCTCGTGCTTCCTC 5554 Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011 | || |||| |||| ||| ||| |||| ||||| || ||||| || || | Sbjct 5555 GTCGCGTCGAAGGACGACAGCATTGACGGGATTTACGACACGCTGAAGGAGTGCGCCGTC 5614 Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071 ||| || || || || ||||| | || ||| || | || || || | Sbjct 5615 ATCAGCAAGGCGGCCGGCGGCATCGGCCTGCACGTGCACAACATCCGCTCCGCCGGCAGC 5674 Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131 |||||| || || || ||||| || |||||||| || || ||||| || || |||||| Sbjct 5675 TACATCGCTGGCACGAACGGCACGTCGAACGGCCTGGTGCCGATGCTGCGCGTGTTCAAC 5734 Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191 ||| |||| ||||||||||||||||| || || | | | ||||| | ||||| | || Sbjct 5735 AACACGGCCCGCTACGTGGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCATTTAC 5794 Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAG---AACCACGGC 94248 |||||||| |||||||| ||| | | ||| | |||| ||| ||| |||| Sbjct 5795 CTCGAGCCGTGGCACGCCGACATCTTCGGCTTCCT---GCTGCTGAAGCGCAACACCGGC 5851 Query 94249 AACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308 || || || | || | |||||||||||||| || ||| | || ||||| || ||| Sbjct 5852 AAGGACGACCAGCGTGCGCGCGACCTCTTCTACGCGCTGTGGATCCCCGACCTGTTCATG 5911 Query 94309 AAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGA-ATGTCCCGGACT 94367 || ||||| ||| | |||| | | | | ||||| | || || || || Sbjct 5912 AAGCGCGTGAAGAGTGAGGGGAAGTGGACGC-TGATGGACCCAAGCACGTGCCCGGGCCT 5970 Query 94368 GTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAA 94427 |||| | || | || || | |||||| || ||||| || ||||| Sbjct 5971 CAGCGACTGCTACGGCGAGGAGTTCGAGCGCCTGTATGAGCGCTACGAGGCGGAGGGCCG 6030 Query 94428 GGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGA 94487 | | || || | || | || ||||| | ||| | || ||| | || Sbjct 6031 CGGAGTGCAGACGATCCAGGCACAGGAGGTGTGGTTTGCGATTCTCGAGTCGCAGATCGA 6090 Query 94488 GACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCA 94547 ||| || || | |||| | | ||||||| | |||| |||||| |||||| || | Sbjct 6091 GACCGGCGTCCCGTTCATCCTCTACAAGGACGCGTGCAACAGCAAGTCGAACCAGAAGAA 6150 Query 94548 CCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGA 94607 |||||| |||||| ||||||| || |||||||||||||| ||||| || || ||||| Sbjct 6151 CCTCGGCACCATCAAGTGCTCGAACCTCTGCACCGAGATTGTGGAGTACACGTCGCCGGA 6210 Query 94608 CGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTG 94644 |||| || ||||| ||||| | ||||||| |||| Sbjct 6211 GGAGACCGCGGTGTGCAACCTCGCCTCCATCGCCCTG 6247 Score = 116 bits (128), Expect = 4e-21 Identities = 201/286 (70%), Gaps = 17/286 (6%) Strand=Plus/Plus Query 95095 CTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCG 95154 ||||||| | || |||||||| ||||| || |||| ||||| ||||||||||||| Sbjct 6695 CTGCTTGCG---CCGATGCCCACCGCCTCGACCTCGCAAATCCTCGGCAACAACGAGTGC 6751 Query 95155 TTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTC 95214 ||||| || |||||||| ||| | || | || ||||| ||| || ||||| || Sbjct 6752 TTCGAGCCTTTCACCTCGAACATCTATGTTCGTCGCGTGCTGAGCGGCGAGTTCCCGGTG 6811 Query 95215 ATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGT---C 95271 | |||||| ||||| | |||||| | | || ||||| ||| | | | | Sbjct 6812 GTGAACAAGTACCTCGTGATGGACCTCATTAAGCGCGGCCTGTGGAATGAGACGATGCGC 6871 Query 95272 AA-GA-ACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATC--CCGCAAATACCGGA 95327 || || | || || ||| |||||||||||| | || |||| | || || ||||| Sbjct 6872 AACGAGATCATCTCCTA-----CAACGGCTCCGTGCTGACCATCGACAGC--ATCCCGGA 6924 Query 95328 GGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 ||| | |||| ||| ||| || ||||||||||||||||||||| Sbjct 6925 CGACCTGAAGGAGCTGTACCGCACGGTGTGGGAGATCCCGCAGCGC 6970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494630235326680