Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq6451 111 1e-19 SEQ14990 102 5e-17 seq3668 102 5e-17 >seq6451 Length=1481 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| || | || | || |||||||| || |||||||| Sbjct 27 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCTTCCAGCTGCTTGCCGGCAAAG 86 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||||| || ||| Sbjct 87 ATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTC 146 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||||| || |||| || || || || || || || ||||||||| Sbjct 147 TCGATGGTGTCGCTCGCCTCGACCTCGAGGGCGATCGTCTTACCGGTCAGGGTCTTCACA 206 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 207 AAGATCTGCAT 217 >SEQ14990 Length=15354 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| || | || | || |||||||| || || || || Sbjct 9144 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAAG 9085 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||||| || ||| Sbjct 9084 ATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTC 9025 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || | |||||| || || | | ||||| || || || || |||||||| Sbjct 9024 TCGATCGTGTCGCTGGCCTCGACCTCCAGCGCAATGGTCTTGCCGGTCAGCGTCTTCACG 8965 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 8964 AAGATCTGCAT 8954 >seq3668 Length=3103 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||||| || | || | || |||||||| || ||||| || Sbjct 197 TCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCGAAG 256 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || |||||||| |||| | ||||||||||| ||||||| || ||| Sbjct 257 ATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTCACGTTC 316 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | || | ||||| || |||| || || || || || || || |||||||| Sbjct 317 TCGATGGTGTCGCTCGCCTCGACCTCGAGGGCGATCGTCTTACCGGTCAGGGTCTTCACG 376 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 377 AAGATCTGCAT 387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324574122356424