Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value SEQ12144 96.9 3e-15 SEQ10630 96.9 3e-15 SEQ10629 96.9 3e-15 >SEQ12144 Length=2121 Score = 96.9 bits (106), Expect = 3e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 52113 CAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCAC 52172 |||||||||||||| ||| || ||||| |||||||||||||||||||||||||| ||| Sbjct 1278 CAGGAGGACATGCCTTTCAACCGCGACGGCGTGGTGCCCGACCTCATCATCAACCCGCAC 1219 Query 52173 GCCTTTCCATCCAGGATGACCGT 52195 ||| |||| ||| | ||||| || Sbjct 1218 GCCATTCCTTCCCGTATGACGGT 1196 >SEQ10630 Length=2617 Score = 96.9 bits (106), Expect = 3e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 52113 CAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCAC 52172 |||||||||||||| ||| || ||||| |||||||||||||||||||||||||| ||| Sbjct 844 CAGGAGGACATGCCTTTCAACCGCGACGGCGTGGTGCCCGACCTCATCATCAACCCGCAC 903 Query 52173 GCCTTTCCATCCAGGATGACCGT 52195 ||| |||| ||| | ||||| || Sbjct 904 GCCATTCCTTCCCGTATGACGGT 926 >SEQ10629 Length=1811 Score = 96.9 bits (106), Expect = 3e-15 Identities = 71/83 (86%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 52113 CAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCCCAC 52172 |||||||||||||| ||| || ||||| |||||||||||||||||||||||||| ||| Sbjct 647 CAGGAGGACATGCCTTTCAACCGCGACGGCGTGGTGCCCGACCTCATCATCAACCCGCAC 588 Query 52173 GCCTTTCCATCCAGGATGACCGT 52195 ||| |||| ||| | ||||| || Sbjct 587 GCCATTCCTTCCCGTATGACGGT 565 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408542735254109