Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value SEQ13725 114 2e-20 >SEQ13725 Length=13927 Score = 114 bits (126), Expect = 2e-20 Identities = 134/179 (75%), Gaps = 8/179 (4%) Strand=Plus/Plus Query 168867 TTCTTCGCCTTCTCGATGAAGTAGTTGCCGATCACGTTGCCGACGCCGCGCGATCCCGAG 168926 |||||||| |||||| ||| | |||||| |||||| |||||||| || || ||| Sbjct 11501 TTCTTCGCGAGCTCGATAAAGACGGAGCCGATGCGGTTGCCCACGCCGCGTGAGCCGGAG 11560 Query 168927 TGCAGCATCACCCACACGTTCGGGTCCGTC-GTCCCCTGATCGGTCTGGATGCAGATTTC 168985 ||||||||||||||||||| ||| | || | || |||||| | || ||||| || Sbjct 11561 TGCAGCATCACCCACACGTGCGGCTGCGGCTGT----TGATCG---TCGAGGCAGAGCTC 11613 Query 168986 GATGAAGTGGTTGCCGCCACCCAGCGACCCGAGTTGGGTCACGTTGTTCGACGTCTCCA 169044 ||||||||||||||| || |||| || || ||| ||| || ||||| | |||||| Sbjct 11614 GATGAAGTGGTTGCCTGTGCCGAGCGTGCCAAGGTGGTTCAGGTGGTTCGTCTTCTCCA 11672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895598074296360