Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value SEQ13725 109 8e-19 >SEQ13725 Length=13927 Score = 109 bits (120), Expect = 8e-19 Identities = 123/166 (74%), Gaps = 9/166 (5%) Strand=Plus/Plus Query 136019 CTCGATGAAGATACGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCAC 136078 |||||| |||| ||||||| |||||| |||||||| ||||| ||||| |||||||| Sbjct 11512 CTCGATAAAGACGGAGCCGATGCGGTTGCCCACGCCGCGTGAGCCGGAGTGCAGCATCAC 11571 Query 136079 CCAGACG---------CGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCC 136129 ||| ||| |||| | ||||||||||||| |||||||||||||||||| Sbjct 11572 CCACACGTGCGGCTGCGGCTGTTGATCGTCGAGGCAGAGCTCGATGAAGTGGTTGCCTGT 11631 Query 136130 GCCCAGGGTGCCCAGTTGGACCACGCTGTTGGCGTTCTTCAGCGCC 136175 ||| || ||||| || ||| || | ||| | |||| |||| || Sbjct 11632 GCCGAGCGTGCCAAGGTGGTTCAGGTGGTTCGTCTTCTCCAGCACC 11677 Score = 102 bits (112), Expect = 1e-16 Identities = 197/280 (70%), Gaps = 12/280 (4%) Strand=Plus/Plus Query 135471 ATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCCTTA 135530 || || ||||||||||||||||| || ||| | || || | ||||| |||||| Sbjct 10910 ATCACTGCGTCGATGTCCTTGTACGCGGCCGGCGTCTCATCCAGCACGCTGCTGTCCTTG 10969 Query 135531 CGGCACTCCACGCCCTCGGTGGCCTTGATC-TGGTCCTCCAGGGTGAAG-GTCGCCTTGG 135588 || ||||| | || ||||||| | || || || | ||||||||| | || | || Sbjct 10970 CGACACTCGATCCCAGTGGTGGCCA-GCTCGTGATCGGCGAGGGTGAAGCGGCGGCGTG- 11027 Query 135589 CCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCCG 135645 ||| ||| |||| | || ||| ||||| ||||||||||| |||||| | ||| Sbjct 11028 CCTC--TCCACGACTGTAGCG-CCGTCCCGCCCCGTGCGAGCAGGAGCAGTAGCTCGCCG 11084 Query 135646 CATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCCGA 135705 | | ||||| ||||| ||||||||| |||||||||||||| || |||| ||| Sbjct 11085 CGCTCCCCTTTCCGCGAACGATGTAGCTACGCGCCCCCATCGAGCCAGGAATGACGGCGA 11144 Query 135706 ACTGGTCCT-TCTGCGCCGACACCGCGCCCTTGCGGGTCA 135744 || | | | |||| ||||| ||||| ||||| |||| Sbjct 11145 GCTCGCCTTGTCTG-GCCGAGGTGGCGCCTTTGCGTGTCA 11183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700313177666520