Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value SEQ13725 129 8e-25 >SEQ13725 Length=13927 Score = 129 bits (142), Expect = 8e-25 Identities = 341/510 (67%), Gaps = 43/510 (8%) Strand=Plus/Plus Query 139994 CTCGATGAAGATACGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCAC 140053 |||||| |||| ||||||| |||||| |||||||| ||||| ||||| |||||||| Sbjct 11512 CTCGATAAAGACGGAGCCGATGCGGTTGCCCACGCCGCGTGAGCCGGAGTGCAGCATCAC 11571 Query 140054 CCAGACG---------CGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCC 140104 ||| ||| |||| | ||||||||||||| |||||||||||||||||| Sbjct 11572 CCACACGTGCGGCTGCGGCTGTTGATCGTCGAGGCAGAGCTCGATGAAGTGGTTGCCTGT 11631 Query 140105 GCCCAGCGTGCCCAGTTGGACGACGCTGTTGGCGTTCTTGAGGGTCTTGTACTTGTCGCA 140164 ||| |||||||| || ||| | | ||| | |||| || | || | ||| Sbjct 11632 GCCGAGCGTGCCAAGGTGGTTCAGGTGGTTCGTCTTCTCCAGCACCCCATAGCGGCGGCA 11691 Query 140165 GAGCTTCTCGAA-CCGGGCTTCCAGGCCCGAGTCGACCCAC---TTGCGCATGATCGAGT 140220 |||| ||| || || || ||||| | ||| | || |||| | |||| Sbjct 11692 CAGCTCCTCAAAGTCGTGC-GCCAGG-TGGTCTCGCCAGACACGTTGC-----ACCGAG- 11743 Query 140221 TCGGGA----TGCCGCTACGCCCGTTCCAGCCGCC-CGACGGAC---CCGGC-------C 140265 ||||| |||| | |||| || || || ||||| | ||| | | Sbjct 11744 GCGGGAGCGTCACCGCGCCACCCG--CCGGCGTCCGCGACGCTCTTGCCGCCGTGTGTGC 11801 Query 140266 CGCCGTGCGGGACGGCGTGCTCGATCAGCGAG-CGCAGCTTGGCGAGGCTGTCGGGCAGG 140324 ||||||||| ||| |||| | | || || |||||| || || ||||||||| Sbjct 11802 GGCCGTGCGGCACGCGCAGCTCCA-CCGCCAGCCGCAGCGCCGCCAGCGAGTCGGGCAGA 11860 Query 140325 TCCGAGGCCTTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATGTCCACGCCCACG 140384 || || ||||||| || |||||| ||||||||||| ||||| ||||| || || Sbjct 11861 TCTCGCGCGGTCAGCGACGTTTCCACGGCGATCATGCCGCACCCGATATCCACCCCGACA 11920 Query 140385 GCCGCCGGGATGATGGCGCCCTTGGTCGGGATCACCGAGC---CCACGGTCGAGCCGATG 140441 ||| |||||||||||| | |||||| | ||| || ||||||| |||| || Sbjct 11921 CTCGCAGGGATGATGGCGTGCACGGTCGGCAGCACGAGGCCCACCACGGTGCAGCCCATA 11980 Query 140442 CCCATGTGGACGTCCGGCATCAGGGCCACA 140471 ||| ||| ||||||||||| | ||| ||| Sbjct 11981 CCCGCGTGCACGTCCGGCATGACGGCGACA 12010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715641496742400