Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value SEQ13725 114 2e-20 >SEQ13725 Length=13927 Score = 114 bits (126), Expect = 2e-20 Identities = 124/166 (75%), Gaps = 9/166 (5%) Strand=Plus/Plus Query 137818 CTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAGCCCGAGTGGAGCATCAC 137877 |||||| |||| | ||||||| |||||| |||||||| ||||| ||||| |||||||| Sbjct 11512 CTCGATAAAGACGGAGCCGATGCGGTTGCCCACGCCGCGTGAGCCGGAGTGCAGCATCAC 11571 Query 137878 CCAGACG---------CGCTGATCCTCGTCGAGGCAGACCTCGATGAAGTGGTTGCCGCC 137928 ||| ||| |||| | ||||||||||||| |||||||||||||||||| Sbjct 11572 CCACACGTGCGGCTGCGGCTGTTGATCGTCGAGGCAGAGCTCGATGAAGTGGTTGCCTGT 11631 Query 137929 GCCCAGGGTGCCCAGTTGGACCACGCTGTTGGCGTTCTTCAGCGCC 137974 ||| || ||||| || ||| || | ||| | |||| |||| || Sbjct 11632 GCCGAGCGTGCCAAGGTGGTTCAGGTGGTTCGTCTTCTCCAGCACC 11677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709588234439840