Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value SEQ14679 84.2 2e-11 SEQ11513 84.2 2e-11 SEQ10795 84.2 2e-11 SEQ10794 84.2 2e-11 >SEQ14679 Length=18604 Score = 84.2 bits (92), Expect = 2e-11 Identities = 176/254 (69%), Gaps = 15/254 (6%) Strand=Plus/Plus Query 142562 TCGTCACCGCGTGGAACCC-TGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATG 142620 || |||| ||||||||||| ||| | | | | | ||||| || ||||| || ||| || Sbjct 15821 TCTTCACGGCGTGGAACCCGTGC-GCACTGCATAAGATGGCCCTCCCTCCTTGCCACCTG 15879 Query 142621 ATGTTCCAATTCCACGTCGACTCGAA---GAAGCGTCTGTCATGCCAGCTGTATCAGCGT 142677 | ||| ||| ||||| || || | |||| |||| ||| |||||| ||||| Sbjct 15880 CTCGGCCAGTTCTACGTCAACACGGACACGAAGGAGTTGTCCTGCATGCTGTACCAGCGC 15939 Query 142678 TCGGCAGAC-TGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACA 142736 ||| ||| ||| || |||| || |||||||||||||| |||||| |||| || || Sbjct 15940 TCGTGTGACATGGGTC-TCGGGGTGCCGTTCAACATTGCGTCGTACTCGCTGCTGAC--- 15995 Query 142737 GCTCATTGCTCGCGAATG----CGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGGCA 142792 | || ||| |||| || | ||| ||| | || || | || |||||| |||| Sbjct 15996 GATC-TTGATCGCAAAGGCGACCGGGCTGCGTCCGGGGGAGCTGGTGCACACCCTCGGTG 16054 Query 142793 ATTCGCACATCTAC 142806 | ||||| ||||| Sbjct 16055 ACGCGCACGTCTAC 16068 >SEQ11513 Length=10065 Score = 84.2 bits (92), Expect = 2e-11 Identities = 176/254 (69%), Gaps = 15/254 (6%) Strand=Plus/Minus Query 142562 TCGTCACCGCGTGGAACCC-TGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATG 142620 || |||| ||||||||||| ||| | | | | | ||||| || ||||| || ||| || Sbjct 8730 TCTTCACGGCGTGGAACCCGTGC-GCACTGCATAAGATGGCCCTCCCTCCTTGCCACCTG 8672 Query 142621 ATGTTCCAATTCCACGTCGACTCGAA---GAAGCGTCTGTCATGCCAGCTGTATCAGCGT 142677 | ||| ||| ||||| || || | |||| |||| ||| |||||| ||||| Sbjct 8671 CTCGGCCAGTTCTACGTCAACACGGACACGAAGGAGTTGTCCTGCATGCTGTACCAGCGC 8612 Query 142678 TCGGCAGAC-TGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACA 142736 ||| ||| ||| || |||| || |||||||||||||| |||||| |||| || || Sbjct 8611 TCGTGTGACATGGGTC-TCGGGGTGCCGTTCAACATTGCGTCGTACTCGCTGCTGAC--- 8556 Query 142737 GCTCATTGCTCGCGAATG----CGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGGCA 142792 | || ||| |||| || | ||| ||| | || || | || |||||| |||| Sbjct 8555 GATC-TTGATCGCAAAGGCGACCGGGCTGCGTCCGGGGGAGCTGGTGCACACCCTCGGTG 8497 Query 142793 ATTCGCACATCTAC 142806 | ||||| ||||| Sbjct 8496 ACGCGCACGTCTAC 8483 >SEQ10795 Length=18609 Score = 84.2 bits (92), Expect = 2e-11 Identities = 176/254 (69%), Gaps = 15/254 (6%) Strand=Plus/Minus Query 142562 TCGTCACCGCGTGGAACCC-TGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATG 142620 || |||| ||||||||||| ||| | | | | | ||||| || ||||| || ||| || Sbjct 2784 TCTTCACGGCGTGGAACCCGTGC-GCACTGCATAAGATGGCCCTCCCTCCTTGCCACCTG 2726 Query 142621 ATGTTCCAATTCCACGTCGACTCGAA---GAAGCGTCTGTCATGCCAGCTGTATCAGCGT 142677 | ||| ||| ||||| || || | |||| |||| ||| |||||| ||||| Sbjct 2725 CTCGGCCAGTTCTACGTCAACACGGACACGAAGGAGTTGTCCTGCATGCTGTACCAGCGC 2666 Query 142678 TCGGCAGAC-TGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACA 142736 ||| ||| ||| || |||| || |||||||||||||| |||||| |||| || || Sbjct 2665 TCGTGTGACATGGGTC-TCGGGGTGCCGTTCAACATTGCGTCGTACTCGCTGCTGAC--- 2610 Query 142737 GCTCATTGCTCGCGAATG----CGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGGCA 142792 | || ||| |||| || | ||| ||| | || || | || |||||| |||| Sbjct 2609 GATC-TTGATCGCAAAGGCGACCGGGCTGCGTCCGGGGGAGCTGGTGCACACCCTCGGTG 2551 Query 142793 ATTCGCACATCTAC 142806 | ||||| ||||| Sbjct 2550 ACGCGCACGTCTAC 2537 >SEQ10794 Length=10062 Score = 84.2 bits (92), Expect = 2e-11 Identities = 176/254 (69%), Gaps = 15/254 (6%) Strand=Plus/Plus Query 142562 TCGTCACCGCGTGGAACCC-TGCTGAAGTCGACGACATGGCACTTCCTCCGTGTCACATG 142620 || |||| ||||||||||| ||| | | | | | ||||| || ||||| || ||| || Sbjct 1336 TCTTCACGGCGTGGAACCCGTGC-GCACTGCATAAGATGGCCCTCCCTCCTTGCCACCTG 1394 Query 142621 ATGTTCCAATTCCACGTCGACTCGAA---GAAGCGTCTGTCATGCCAGCTGTATCAGCGT 142677 | ||| ||| ||||| || || | |||| |||| ||| |||||| ||||| Sbjct 1395 CTCGGCCAGTTCTACGTCAACACGGACACGAAGGAGTTGTCCTGCATGCTGTACCAGCGC 1454 Query 142678 TCGGCAGAC-TGGTTCCTCGGCGTTCCGTTCAACATTGCTTCGTACGCGCTTCTCACACA 142736 ||| ||| ||| || |||| || |||||||||||||| |||||| |||| || || Sbjct 1455 TCGTGTGACATGGGTC-TCGGGGTGCCGTTCAACATTGCGTCGTACTCGCTGCTGAC--- 1510 Query 142737 GCTCATTGCTCGCGAATG----CGGTCTGGAACTCGGAGACTTCGTCCACACCTTCGGCA 142792 | || ||| |||| || | ||| ||| | || || | || |||||| |||| Sbjct 1511 GATC-TTGATCGCAAAGGCGACCGGGCTGCGTCCGGGGGAGCTGGTGCACACCCTCGGTG 1569 Query 142793 ATTCGCACATCTAC 142806 | ||||| ||||| Sbjct 1570 ACGCGCACGTCTAC 1583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500405149944080