Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value SEQ14679 203 4e-47 SEQ11513 203 4e-47 SEQ10795 203 4e-47 SEQ10794 203 4e-47 >SEQ14679 Length=18604 Score = 203 bits (224), Expect = 4e-47 Identities = 419/614 (68%), Gaps = 16/614 (3%) Strand=Plus/Minus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||||||| ||||| | |||||||||||| |||||||||||||||| || ||||||| Sbjct 16102 CCAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGT 16043 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 |||| | |||||||| || |||||| | | || | || | || |||||||||| Sbjct 16042 GCACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGT 15983 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085 | || |||||||| || ||||| || |||||||| | ||| | |||||||||| || Sbjct 15982 ACGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGGTACAGCATGC 15923 Query 147086 ACGAGAGCTCC-------CCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGC 147138 | || | |||| |||| | ||||| ||||||| || | |||||| || || Sbjct 15922 AGGACAACTCCTTCGTGTCCGT-GTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGAGGG 15864 Query 147139 AGCGCCATGGCGGGCAGGTCCGC-GGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-T 147196 || ||||| ||| || ||| |||||||| |||| || | |||||| | | || | Sbjct 15863 AGGGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGT 15806 Query 147197 CGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGT 147256 ||||| |||| | |||| || | | | ||||||||||||| ||| ||| Sbjct 15805 TCGGGTTTGTCTTGAGGGTCTCGACAATTTGCTTGATTTGGTCCACGCCCTCGCCGTCGT 15746 Query 147257 AGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTG 147316 |||| | | || || |||| || || ||||| | ||||||||| ||||| || | Sbjct 15745 AGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACAG 15686 Query 147317 GCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC--TTGAGAAACTCGGGGGA 147374 | || ||||| ||| | | || ||||| || || | || |||||| | || Sbjct 15685 GGCCGAGGTCCATCTCCTTATTCTCCG-TCAGCCC-CCGGCTGTCCAGGAACTCGCGCGA 15628 Query 147375 CCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCC 147434 |||| | ||||||||||| | ||||| | | ||| || | || ||| || Sbjct 15627 GCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCACC 15568 Query 147435 CCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAG 147494 || | ||||||| || |||||| | || || | ||| || || | ||| || ||||| Sbjct 15567 ACGCAAAAACCAGATCAACTCCTCGCACACGCCACGCCAGAAAACGCGCTTCGTCGTCAG 15508 Query 147495 CAGGGGGAACTGGT 147508 ||| || | || || Sbjct 15507 CAGAGGCAGCTTGT 15494 >SEQ11513 Length=10065 Score = 203 bits (224), Expect = 4e-47 Identities = 419/614 (68%), Gaps = 16/614 (3%) Strand=Plus/Plus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||||||| ||||| | |||||||||||| |||||||||||||||| || ||||||| Sbjct 8449 CCAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGT 8508 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 |||| | |||||||| || |||||| | | || | || | || |||||||||| Sbjct 8509 GCACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGT 8568 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085 | || |||||||| || ||||| || |||||||| | ||| | |||||||||| || Sbjct 8569 ACGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGGTACAGCATGC 8628 Query 147086 ACGAGAGCTCC-------CCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGC 147138 | || | |||| |||| | ||||| ||||||| || | |||||| || || Sbjct 8629 AGGACAACTCCTTCGTGTCCGT-GTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGAGGG 8687 Query 147139 AGCGCCATGGCGGGCAGGTCCGC-GGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-T 147196 || ||||| ||| || ||| |||||||| |||| || | |||||| | | || | Sbjct 8688 AGGGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGT 8745 Query 147197 CGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGT 147256 ||||| |||| | |||| || | | | ||||||||||||| ||| ||| Sbjct 8746 TCGGGTTTGTCTTGAGGGTCTCGACAATTTGCTTGATTTGGTCCACGCCCTCGCCGTCGT 8805 Query 147257 AGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTG 147316 |||| | | || || |||| || || ||||| | ||||||||| ||||| || | Sbjct 8806 AGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACAG 8865 Query 147317 GCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC--TTGAGAAACTCGGGGGA 147374 | || ||||| ||| | | || ||||| || || | || |||||| | || Sbjct 8866 GGCCGAGGTCCATCTCCTTATTCTCCG-TCAGCCC-CCGGCTGTCCAGGAACTCGCGCGA 8923 Query 147375 CCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCC 147434 |||| | ||||||||||| | ||||| | | ||| || | || ||| || Sbjct 8924 GCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCACC 8983 Query 147435 CCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAG 147494 || | ||||||| || |||||| | || || | ||| || || | ||| || ||||| Sbjct 8984 ACGCAAAAACCAGATCAACTCCTCGCACACGCCACGCCAGAAAACGCGCTTCGTCGTCAG 9043 Query 147495 CAGGGGGAACTGGT 147508 ||| || | || || Sbjct 9044 CAGAGGCAGCTTGT 9057 >SEQ10795 Length=18609 Score = 203 bits (224), Expect = 4e-47 Identities = 419/614 (68%), Gaps = 16/614 (3%) Strand=Plus/Plus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||||||| ||||| | |||||||||||| |||||||||||||||| || ||||||| Sbjct 2503 CCAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGT 2562 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 |||| | |||||||| || |||||| | | || | || | || |||||||||| Sbjct 2563 GCACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGT 2622 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085 | || |||||||| || ||||| || |||||||| | ||| | |||||||||| || Sbjct 2623 ACGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGGTACAGCATGC 2682 Query 147086 ACGAGAGCTCC-------CCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGC 147138 | || | |||| |||| | ||||| ||||||| || | |||||| || || Sbjct 2683 AGGACAACTCCTTCGTGTCCGT-GTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGAGGG 2741 Query 147139 AGCGCCATGGCGGGCAGGTCCGC-GGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-T 147196 || ||||| ||| || ||| |||||||| |||| || | |||||| | | || | Sbjct 2742 AGGGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGT 2799 Query 147197 CGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGT 147256 ||||| |||| | |||| || | | | ||||||||||||| ||| ||| Sbjct 2800 TCGGGTTTGTCTTGAGGGTCTCGACAATTTGCTTGATTTGGTCCACGCCCTCGCCGTCGT 2859 Query 147257 AGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTG 147316 |||| | | || || |||| || || ||||| | ||||||||| ||||| || | Sbjct 2860 AGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACAG 2919 Query 147317 GCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC--TTGAGAAACTCGGGGGA 147374 | || ||||| ||| | | || ||||| || || | || |||||| | || Sbjct 2920 GGCCGAGGTCCATCTCCTTATTCTCCG-TCAGCCC-CCGGCTGTCCAGGAACTCGCGCGA 2977 Query 147375 CCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCC 147434 |||| | ||||||||||| | ||||| | | ||| || | || ||| || Sbjct 2978 GCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCACC 3037 Query 147435 CCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAG 147494 || | ||||||| || |||||| | || || | ||| || || | ||| || ||||| Sbjct 3038 ACGCAAAAACCAGATCAACTCCTCGCACACGCCACGCCAGAAAACGCGCTTCGTCGTCAG 3097 Query 147495 CAGGGGGAACTGGT 147508 ||| || | || || Sbjct 3098 CAGAGGCAGCTTGT 3111 >SEQ10794 Length=10062 Score = 203 bits (224), Expect = 4e-47 Identities = 419/614 (68%), Gaps = 16/614 (3%) Strand=Plus/Minus Query 146906 CCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGT 146965 ||||||| ||||| | |||||||||||| |||||||||||||||| || ||||||| Sbjct 1617 CCAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGT 1558 Query 146966 GCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 |||| | |||||||| || |||||| | | || | || | || |||||||||| Sbjct 1557 GCACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGT 1498 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGC 147085 | || |||||||| || ||||| || |||||||| | ||| | |||||||||| || Sbjct 1497 ACGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGGTACAGCATGC 1438 Query 147086 ACGAGAGCTCC-------CCGTCGGCCACGTAAAACTGGCACAGGATGTGGCACGGCGGC 147138 | || | |||| |||| | ||||| ||||||| || | |||||| || || Sbjct 1437 AGGACAACTCCTTCGTGTCCGT-GTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGAGGG 1379 Query 147139 AGCGCCATGGCGGGCAGGTCCGC-GGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-T 147196 || ||||| ||| || ||| |||||||| |||| || | |||||| | | || | Sbjct 1378 AGGGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGT 1321 Query 147197 CGGGGTTCCTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGT 147256 ||||| |||| | |||| || | | | ||||||||||||| ||| ||| Sbjct 1320 TCGGGTTTGTCTTGAGGGTCTCGACAATTTGCTTGATTTGGTCCACGCCCTCGCCGTCGT 1261 Query 147257 AGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTG 147316 |||| | | || || |||| || || ||||| | ||||||||| ||||| || | Sbjct 1260 AGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACAG 1201 Query 147317 GCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGC--TTGAGAAACTCGGGGGA 147374 | || ||||| ||| | | || ||||| || || | || |||||| | || Sbjct 1200 GGCCGAGGTCCATCTCCTTATTCTCCG-TCAGCCC-CCGGCTGTCCAGGAACTCGCGCGA 1143 Query 147375 CCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCC 147434 |||| | ||||||||||| | ||||| | | ||| || | || ||| || Sbjct 1142 GCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGCTGCGCGTTCGTCTCACC 1083 Query 147435 CCGGATGAACCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAG 147494 || | ||||||| || |||||| | || || | ||| || || | ||| || ||||| Sbjct 1082 ACGCAAAAACCAGATCAACTCCTCGCACACGCCACGCCAGAAAACGCGCTTCGTCGTCAG 1023 Query 147495 CAGGGGGAACTGGT 147508 ||| || | || || Sbjct 1022 CAGAGGCAGCTTGT 1009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583378355311200