Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11]
15,033 sequences; 67,441,112 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq9113 100 9e-16
seq8796 87.8 6e-12
seq6209 87.8 6e-12
>seq9113
Length=16536
Score = 100 bits (110), Expect = 9e-16
Identities = 168/242 (69%), Gaps = 1/242 (0%)
Strand=Plus/Plus
Query 254981 CCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAACGC 255040
|| ||| | || |||||||||||| ||| |||||||| || || || ||||| || |||
Sbjct 5714 CCGATGCTGCGCGTGTTCAACAACACGGCCCGCTACGTGGACCAGGGCGGCGGTAAGCGC 5773
Query 255041 CCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACATTGAACGGTTTTTACTG 255100
|| || ||| |||| ||||| |||||||||||||||||||| | || | |||
Sbjct 5774 AAGGGCGCCTTCGCCATTTACCTCGAGCCGTGGCACGCCGACATCTTCGGCTTCCTGCTG 5833
Query 255101 CTGTCCGACAAGACCGGCACCGAGGAGCTGATCGCCCGCGACATCTACACCGCTGTCTGG 255160
||| ||| ||||||| || || | | || |||||| ||| | ||| | |||
Sbjct 5834 CTGAAGCGCAACACCGGCAAGGACGACCAGCGTGCGCGCGACCTCTTCTACGCGCTGTGG 5893
Query 255161 TGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGAGACCTGGAGCCTCATGTGTCCC 255220
| ||| ||||| ||| |||||| | | || | || |||| || ||| | |||
Sbjct 5894 ATCCCCGACCTGTTCATGAAGCGCGTGAAGAGTGAGGGGAAGTGGACGCTGATG-GACCC 5952
Query 255221 AA 255222
||
Sbjct 5953 AA 5954
Score = 86.0 bits (94), Expect = 2e-11
Identities = 204/306 (67%), Gaps = 2/306 (1%)
Strand=Plus/Plus
Query 256143 TGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGCACCGCTCAAATCCTGGGTA 256202
|||||||||| | | | ||||| ||||| |||||| ||| | |||||||| || |
Sbjct 6681 TGCGCAACTCTCTCCTGCTTGCGCCGATGCCCACCGCCTCGACCTCGCAAATCCTCGGCA 6740
Query 256203 ACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCGCGCCGCGTTCGCTCCGGCG 256262
|| || || |||| || | || | ||| ||| || ||||| | |||||
Sbjct 6741 ACAACGAGTGCTTCGAGCCTTTCACCTCGAACATCTATGTTCGTCGCGTGCTGAGCGGCG 6800
Query 256263 AGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTACGACTCGGTCTGTGGAACG 256322
||||| | ||||||||| ||||| | ||| ||| | | | ||| |||||||| |
Sbjct 6801 AGTTCCCGGTGGTGAACAAGTACCTCGTGATGGACCTCATTAAGCGCGGCCTGTGGAATG 6860
Query 256323 AGAAGATGCAACAACGC-ATAATTCGGGCCCGTGGGTCGGTGCAGAACATTGAGCGCTTG 256381
||| ||||| ||||| || || | || || |||| || ||| || || |
Sbjct 6861 AGACGATGCG-CAACGAGATCATCTCCTACAACGGCTCCGTGCTGACCATCGACAGCATC 6919
Query 256382 CCGTTCCGCTTGCGCGAGGTATACCGCACGGTATGGGAGATGCCGCAACGATTGTTGGTC 256441
||| | | || ||| | ||||||||||| |||||||| ||||| || | || ||
Sbjct 6920 CCGGACGACCTGAAGGAGCTGTACCGCACGGTGTGGGAGATCCCGCAGCGCAAGCTGATC 6979
Query 256442 GACTTG 256447
||| ||
Sbjct 6980 GACATG 6985
>seq8796
Length=7791
Score = 87.8 bits (96), Expect = 6e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 443770 TTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGT 443829
|||||| |||| ||||| || || |||| || ||||| || || ||||| ||||||
Sbjct 7378 TTCTGGCTGAAGAAGCGCGGGCTGATGCCTGGGCTGACGTTCAGCAACGAGCTGATCTCG 7437
Query 443830 CGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACATCGTGCAC 443889
|| |||||||| |||| |||||||| || || || |||| | |||||| ||||
Sbjct 7438 CGCGACGAGGGGCTGCACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCAC 7497
Query 443890 AAGCTGCC 443897
||||||||
Sbjct 7498 AAGCTGCC 7505
>seq6209
Length=3470
Score = 87.8 bits (96), Expect = 6e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 443770 TTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGT 443829
|||||| |||| ||||| || || |||| || ||||| || || ||||| ||||||
Sbjct 276 TTCTGGCTGAAGAAGCGCGGGCTGATGCCTGGGCTGACGTTCAGCAACGAGCTGATCTCG 335
Query 443830 CGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACATCGTGCAC 443889
|| |||||||| |||| |||||||| || || || |||| | |||||| ||||
Sbjct 336 CGCGACGAGGGGCTGCACACGGACTTCGCGTGCCTGCTGTACAACTCGCACATCAAGCAC 395
Query 443890 AAGCTGCC 443897
||||||||
Sbjct 396 AAGCTGCC 403
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588030070106685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |