Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11] 15,033 sequences; 67,441,112 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq8796 131 2e-25 seq6209 131 2e-25 >seq8796 Length=7791 Score = 131 bits (144), Expect = 2e-25 Identities = 352/529 (67%), Gaps = 16/529 (3%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || |||||| ||||||||||||||| ||||| || | || ||| ||||||| Sbjct 7757 TACTCGCCAACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATG 7698 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGG--CACTCCAATCTGTTTGAGGAGAC 129845 || || || || | | | ||| | |||| || || | | || || | Sbjct 7697 AAGTCGAAGGGCTGCGTCACGTTGTAG--TGCTTCTCCAGCCCCAGCGACACCAGCAGCC 7640 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | |||| ||| |||| ||||||| |||||| ||| | |||||| ||||| || Sbjct 7639 GGTCCGCAACGAACTCGATGTACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCA 7580 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 || |||||||| |||||||| | ||| |||| ||| || ||| | ||| | Sbjct 7579 CCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCGTCCACGATGATCTCCA 7520 Query 129966 GAATGGTCTC-CGTGCCAGGTCTATTGCGCAAAGTC----TTGAAGAGTTC-CACGGCAA 130019 | | | ||| || | ||| || ||| | || ||| | || |||| | | Sbjct 7519 GCACGCGCTCGCGCGGCAG--CTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACG-CGA 7463 Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079 | ||| ||| || |||||||| || ||||| || || || ||| ||| || |||| Sbjct 7462 AGTCCGTGTGCAGCCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAGCCCAGGCA 7403 Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139 | || || |||||||||| |||||| | ||| || || || || ||||||||||| |||| Sbjct 7402 TCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCCCT 7343 Query 130140 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACT 130199 |||| ||||||| | | || ||||| || | || | | | | | |||| Sbjct 7342 CCACCGCCGCGAACCCGATCAGCCGCTCCTGGAA-GCTCGCGCC--GCTCCCGATCCACC 7286 Query 130200 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 || ||||||| |||||| |||| ||| ||||||| ||||||||||| Sbjct 7285 GCACAGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGC 7237 >seq6209 Length=3470 Score = 131 bits (144), Expect = 2e-25 Identities = 352/529 (67%), Gaps = 16/529 (3%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || |||||| ||||||||||||||| ||||| || | || ||| ||||||| Sbjct 655 TACTCGCCAACCTTCTTCTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATCTCCATG 596 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCAAATTGCTGG--CACTCCAATCTGTTTGAGGAGAC 129845 || || || || | | | ||| | |||| || || | | || || | Sbjct 595 AAGTCGAAGGGCTGCGTCACGTTGTAG--TGCTTCTCCAGCCCCAGCGACACCAGCAGCC 538 Query 129846 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTAC 129905 | |||| ||| |||| ||||||| |||||| ||| | |||||| ||||| || Sbjct 537 GGTCCGCAACGAACTCGATGTACTGCGACATCAGCTCCGCGTTCATGCCGATCAGCCGCA 478 Query 129906 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT 129965 || |||||||| |||||||| | ||| |||| ||| || ||| | ||| | Sbjct 477 CCGGCAGCGCGTCGCAGATGAACTCGCGCTCGATGTTCACCGCGTCCACGATGATCTCCA 418 Query 129966 GAATGGTCTC-CGTGCCAGGTCTATTGCGCAAAGTC----TTGAAGAGTTC-CACGGCAA 130019 | | | ||| || | ||| || ||| | || ||| | || |||| | | Sbjct 417 GCACGCGCTCGCGCGGCAG--CTTGTGCTTGATGTGCGAGTTGTACAGCAGGCACG-CGA 361 Query 130020 ACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCA 130079 | ||| ||| || |||||||| || ||||| || || || ||| ||| || |||| Sbjct 360 AGTCCGTGTGCAGCCCCTCGTCGCGCGAGATCAGCTCGTTGCTGAACGTCAGCCCAGGCA 301 Query 130080 TGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCT 130139 | || || |||||||||| |||||| | ||| || || || || ||||||||||| |||| Sbjct 300 TCAGCCCGCGCTTCTTCAGCCAGAACAGCGCGCAGAACGACCCCGAGAAGAAGATGCCCT 241 Query 130140 CCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAACCACT 130199 |||| ||||||| | | || ||||| || | || | | | | | |||| Sbjct 240 CCACCGCCGCGAACCCGATCAGCCGCTCCTGGAA-GCTCGCGCC--GCTCCCGATCCACC 184 Query 130200 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC 130248 || ||||||| |||||| |||| ||| ||||||| ||||||||||| Sbjct 183 GCACAGCCCACTCCGCCTTCTTCTGGATGCACGGGATCGTCTGGATCGC 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618318988295480