Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216535.1_202017-07-11]
15,033 sequences; 67,441,112 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
SEQ14990 84.2 2e-11
seq6451 84.2 2e-11
>SEQ14990
Length=15354
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||| | || ||||| ||| || || || || || || || || || || |
Sbjct 9169 GCGCAGCACNAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCC 9110
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
|| || ||||| ||||| || || || || ||||||||||| | || | || ||| ||
Sbjct 9109 CTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 9050
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
|||| || ||| || | || | | ||| ||||| | ||| || |||| || ||
Sbjct 9049 GTCCTGAATCTTCGCCTTCACGTTCTCGATCGTGTCGCTGGCCTCGACCTCCAGCGCAAT 8990
Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || |||||||| || || ||||| |||||
Sbjct 8989 GGTCTTGCCGGTCAGCGTCTTCACGAAGATCTGCAT 8954
>seq6451
Length=1481
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||| | || ||||| ||| || || || || || || || || || || |
Sbjct 2 GCGCAGCACGAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCC 61
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
|| || ||||| ||||| ||||| || || ||||||||||| | || | || ||| ||
Sbjct 62 CTCTTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTT 121
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
|||| || ||| || | || | | || ||||||| ||| || || | | |||
Sbjct 122 GTCCTGAATCTTCGCCTTCACGTTCTCGATGGTGTCGCTCGCCTCGACCTCGAGGGCGAT 181
Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || || ||||| || || |||||||| |||||
Sbjct 182 CGTCTTACCGGTCAGGGTCTTCACAAAGATCTGCAT 217
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429466900937129
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |