Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq9639 208 9e-49 seq9638 208 9e-49 >seq9639 Length=11758 Score = 208 bits (230), Expect = 9e-49 Identities = 430/630 (68%), Gaps = 25/630 (4%) Strand=Plus/Minus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| ||||||| | |||||||||||| |||||||||||||||| || ||| ||| Sbjct 8336 CAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGTG 8277 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 | | ||||| || || || || | |||| || | |||||||| ||||| Sbjct 8276 CACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGTA 8217 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 || |||||||| |||||||| || |||||||| | ||||||||| |||||| ||| Sbjct 8216 CGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGATACAGCATGCA 8157 Query 145851 GGAGAGCTC---CCCGCCCG---CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904 ||| | ||| | | ||| ||||||||||||| || |||||||| || || || Sbjct 8156 GGACAACTCCTTCGTGTCCGTGTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGGGGGAG 8097 Query 145905 GGCCATGGCGGGCAGGTCCGC-CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCG 145962 |||||| ||| || ||| ||||||||| || |||| || |||| | | || | Sbjct 8096 GGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGTTC 8039 Query 145963 GGGTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGG 146019 |||||| |||||| |||| | || | | ||| |||||||||||||| || | Sbjct 8038 GGGTTCGTCTTGAGGGTCTCGACAAT---TTGCTTGATCTGGTCCACGCCCTCGCCGTCG 7982 Query 146020 TAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACG 146079 || | | | || || |||| | || |||||||| | ||||||||| |||||||| Sbjct 7981 TAGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACA 7922 Query 146080 GGCCCCAGGTCCCCGGGCTCCCTGTGCCC---CAGCCCGGCCCGGGCGAGGAAGTCCCGG 146136 || || |||||| |||| | | | | |||||| | | | | ||| || || Sbjct 7921 GGGCCAAGGTCC---ATCTCCTTATTCTCCGTCAGCCCCCGGCTGTCCAAGAACTCGCGC 7865 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || |||||| |||||||||| | | | || | | | ||| | | || ||| Sbjct 7864 GAGCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGTTGCGCGTTCGTCTCA 7805 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 || | | ||||||| || ||| ||| || || | |||||| || | ||| || ||| Sbjct 7804 CCACGCAGAAACCAGATCAACTCCTCGCACACGCCGCGCCAGAAAACGCGCTTCGTCGTC 7745 Query 146257 AGCAGGGGGAACTGG---CCCCGCAGGGAG 146283 ||||| || | || | | ||||||||| Sbjct 7744 AGCAGAGGCAGCTTGTTATCGCGCAGGGAG 7715 >seq9638 Length=11764 Score = 208 bits (230), Expect = 9e-49 Identities = 430/630 (68%), Gaps = 25/630 (4%) Strand=Plus/Minus Query 145671 CAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTG 145730 |||||| ||||||| | |||||||||||| |||||||||||||||| || ||| ||| Sbjct 8342 CAGCTGCTGCTTCAGCGCATCCACGTGGTTGCGGTAGACGTGCGCGTCACCGAGGGTGTG 8283 Query 145731 GATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTA 145790 | | ||||| || || || || | |||| || | |||||||| ||||| Sbjct 8282 CACCAGCTCCCCCGGACGCAGCCCGGTCGCCTTTGCGATCAAGATCGTCAGCAGCGAGTA 8223 Query 145791 GCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCA 145850 || |||||||| |||||||| || |||||||| | ||||||||| |||||| ||| Sbjct 8222 CGACGCAATGTTGAACGGCACCCCGAGACCCATGTCACACGAGCGCTGATACAGCATGCA 8163 Query 145851 GGAGAGCTC---CCCGCCCG---CCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAG 145904 ||| | ||| | | ||| ||||||||||||| || |||||||| || || || Sbjct 8162 GGACAACTCCTTCGTGTCCGTGTTGACGTAGAACTGGCCGAGCAGGTGGCAAGGGGGGAG 8103 Query 145905 GGCCATGGCGGGCAGGTCCGC-CGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-TCG 145962 |||||| ||| || ||| ||||||||| || |||| || |||| | | || | Sbjct 8102 GGCCATCTTATGCA-GTGCGCACGGGTTCCACGCCGTGAAGAGCAGCCGGC-GATCGTTC 8045 Query 145963 GGGTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGG 146019 |||||| |||||| |||| | || | | ||| |||||||||||||| || | Sbjct 8044 GGGTTCGTCTTGAGGGTCTCGACAAT---TTGCTTGATCTGGTCCACGCCCTCGCCGTCG 7988 Query 146020 TAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACG 146079 || | | | || || |||| | || |||||||| | ||||||||| |||||||| Sbjct 7987 TAGTTGGCGTCAAAGCCCTTGTACTCCGCACCGAAGTGACGCCACTGGAAACCGTAGACA 7928 Query 146080 GGCCCCAGGTCCCCGGGCTCCCTGTGCCC---CAGCCCGGCCCGGGCGAGGAAGTCCCGG 146136 || || |||||| |||| | | | | |||||| | | | | ||| || || Sbjct 7927 GGGCCAAGGTCC---ATCTCCTTATTCTCCGTCAGCCCCCGGCTGTCCAAGAACTCGCGC 7871 Query 146137 GACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGAC 146196 || |||||| |||||||||| | | | || | | | ||| | | || ||| Sbjct 7870 GAGCCGTTGCCGTCCCAGATGTGAATGTCCTTGTCCGCCAGCAGTTGCGCGTTCGTCTCA 7811 Query 146197 CCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTC 146256 || | | ||||||| || ||| ||| || || | |||||| || | ||| || ||| Sbjct 7810 CCACGCAGAAACCAGATCAACTCCTCGCACACGCCGCGCCAGAAAACGCGCTTCGTCGTC 7751 Query 146257 AGCAGGGGGAACTGG---CCCCGCAGGGAG 146283 ||||| || | || | | ||||||||| Sbjct 7750 AGCAGAGGCAGCTTGTTATCGCGCAGGGAG 7721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590002605218360