Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6969 334 7e-87 seq6968 334 7e-87 seq6967 334 7e-87 seq9960 96.9 3e-15 seq5028 93.3 4e-14 seq5564 91.5 1e-13 >seq6969 Length=25347 Score = 334 bits (370), Expect = 7e-87 Identities = 554/792 (70%), Gaps = 6/792 (1%) Strand=Plus/Minus Query 23020 GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 |||||| ||||| || ||||| || || ||| || ||||||||||| ||||| || Sbjct 10978 GGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACGTGTACTCCACAATCTC 10919 Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCA 23139 ||| || || || ||||| || ||||| | || ||||||| || | ||||| Sbjct 10918 GGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCA 10859 Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCG 23199 || ||||||||||| ||| |||| ||| ||||||| ||||||||||| ||||| Sbjct 10858 CGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATCGCAAA 10799 Query 23200 CCACATAGTCTGAGCGTGAACACGTC-GCACGTACCTGCCTTCTTCCTCGTACTTTTGGT 23258 ||||| ||| || || | |||| |||| | ||| || ||||||| | || Sbjct 10798 CCACACCTCCTGTGCCTGGAT-CGTCTGCACTCCGCGGCCCTCCGCCTCGTAGCGCTCGT 10740 Query 23259 ACAACGCG-TCAAATTCGGCACCGTAACAGTCGGCCAGGCC-GGGCGATTGCATCGGACA 23316 ||| ||| || || || | ||||| ||||| || || |||| | | | || | Sbjct 10739 ACAG-GCGCTCGAACTCCTCGCCGTAGCAGTCACTGAGACCCGGGCACGTACTTGGGTC- 10682 Query 23317 CATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 ||| || ||||| | ||| | | ||||| |||| || || || || ||||| || Sbjct 10681 CATCAGCGTCCACTTCCCCTCACTCTTCACGCGCTTCATGAACAGGTCGGGGATCCACAG 10622 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 |||||||| || ||||| || ||| || || ||||||||||| |||| || Sbjct 10621 CGCGTAGAAGAGGTCGCGCGCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAGCAGCAG 10562 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 ||| | || | ||| || ||||||||||||||||||| ||| || |||||| | ||| Sbjct 10561 GAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTTGCGCTT 10502 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 | ||||||||| || ||||| ||||||||||||||| |||| | ||||||||||| || Sbjct 10501 ACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGGCACCAG 10442 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 ||||| |||| |||| ||| || | || | || | |||||| || Sbjct 10441 GCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTTGTGCAC 10382 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 ||| | || ||||| ||| ||| || || | ||||| | ||||| |||||||| Sbjct 10381 GTGCAGGCCGATGCCGCCGGCCGCCTTGCTGATGACGGCGCACTCCTTCAGCGTGTCGTA 10322 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 ||| || || |||||||| || || | |||||| | ||| ||||| ||| |||| || Sbjct 10321 GATCCCGTCAATGCTGTCGTCCTTCGACGCGACGAGGAAGCACGAGCTCATCTGCGGCTT 10262 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAG 23796 ||||| |||| ||| || |||||| |||||||||| || | || |||||||| || Sbjct 10261 CGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAAAAAGCCCTTCGACATCAG 10202 Query 23797 ATTGTACGTGTC 23808 || |||||| || Sbjct 10201 ATCGTACGTCTC 10190 Score = 150 bits (166), Expect = 2e-31 Identities = 506/781 (65%), Gaps = 19/781 (2%) Strand=Plus/Minus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 ||||| ||||||| || || | ||||||| || ||||| || || |||| |||||| Sbjct 11895 TCCACCGTAAACTTAATCGCATCGGCGGCCGCCTTCGTGCGCAGGTAGTACACACCCGTC 11836 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 ||||||||| || ||||| ||| || | |||||||| | | || | | || Sbjct 11835 TTCAGACCCGACTCCCACGTGTAGAAGAGCATCGACGTGATCTGGCCCGAGGTGGGGCTC 11776 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | || | | | || | |||||| ||| ||||| || || || ||| |||||| Sbjct 11775 TGCAGGAAGAGGTTCAGCGACTGGGACTGGTCGATGTACTGGCCGCGGTCGCGGGCCATG 11716 Query 22289 TTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAAC 22348 | |||| | ||| || || ||||| || || |||||| | | | | || | Sbjct 11715 TCGATCAGCTTGCGCTGCGGGATCTCCCACACCGTGCGGTACAGCTCCTTCAGGTCGTCC 11656 Query 22349 GGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTA 22408 || || ||||| || | ||||| ||||| | | |||||| || ||||| Sbjct 11655 GGGATGCTGTCGATGGTCAGCACGGAGCCGTTGTAGGAGATGATCTCGTTGCGCATCGTC 11596 Query 22409 TCGTTCCACAAACCGATGGCGGTCAAA----TCTTTGACCAGATGACGGTTCACCACTTG 22464 || ||||||| ||| || | || || | || || | ||||||||| | Sbjct 11595 TCATTCCACAGGCCG----CGCTTAATGAGGTCCATCACGAGGTACTTGTTCACCACCGG 11540 Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 ||||||||| || ||||| || || ||||| || ||||| || ||||| | || Sbjct 11539 GAACTCGCCGCTCAGCACGCGACGAACATAGATGTTCGAGGTGAAAGGCTCGAAGCACTC 11480 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 ||||| || || || || | |||||| ||||| ||||||||||| | ||| || ||||| Sbjct 11479 GTTGTTGCCGAGGATTTGCGAGGTCGAGGCGGTGGGCATCGGCGCAAGCAGGAGAGAGTT 11420 Query 22585 TCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATC---GGA 22641 | || |||| || | || |||||| | ||| |||||| | | | Sbjct 11419 GCGCATGCCGACCTGCACCACCTTCTGCTTGAGGCTGTCCCAATCCCACCGGCCGCTGTT 11360 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 ||| | || | |||||| ||| | |||| | ||| |||| || |||||||| | Sbjct 11359 CGGGCGCGGGTTCTTCCACATGTCGAACTGCAGGATGCCCTGACTGGCTGGGCTGCCCTT 11300 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGC-TCGCCTCCAACGCGCCGT 22760 | |||| ||||| || || | | || || || || | || ||||| ||| || Sbjct 11299 GAACGTCTCGTAGGGGCCCTCCTCCTTCGCCAGCTC-CATCGACGACTCCACGGCGGCGA 11241 Query 22761 AATATATAGTCTCGAAGATTTTCTTGTTCAATTCG-GCGGCG--GCGACGCTTTCGTACG 22817 | || || || |||||||| | | ||||| || || ||| | ||| || | | Sbjct 11240 AGTAGATCGTTTCGAAGATCTCCGCGTTCA---CGCGCTGCGCCTCAGGGCTGGCGAAGG 11184 Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 ||| |||| || | ||| |||||||||| || || ||||| | || | ||| |||| Sbjct 11183 GCAGGCGCAGCAGGATGAAGGCGTCCGCCAGGCCTTGCACGCCCAGGCCCACCGGGCGGT 11124 Query 22878 T 22878 | Sbjct 11123 T 11123 >seq6968 Length=12362 Score = 334 bits (370), Expect = 7e-87 Identities = 554/792 (70%), Gaps = 6/792 (1%) Strand=Plus/Minus Query 23020 GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 |||||| ||||| || ||||| || || ||| || ||||||||||| ||||| || Sbjct 10978 GGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACGTGTACTCCACAATCTC 10919 Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCA 23139 ||| || || || ||||| || ||||| | || ||||||| || | ||||| Sbjct 10918 GGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCA 10859 Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCG 23199 || ||||||||||| ||| |||| ||| ||||||| ||||||||||| ||||| Sbjct 10858 CGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATCGCAAA 10799 Query 23200 CCACATAGTCTGAGCGTGAACACGTC-GCACGTACCTGCCTTCTTCCTCGTACTTTTGGT 23258 ||||| ||| || || | |||| |||| | ||| || ||||||| | || Sbjct 10798 CCACACCTCCTGTGCCTGGAT-CGTCTGCACTCCGCGGCCCTCCGCCTCGTAGCGCTCGT 10740 Query 23259 ACAACGCG-TCAAATTCGGCACCGTAACAGTCGGCCAGGCC-GGGCGATTGCATCGGACA 23316 ||| ||| || || || | ||||| ||||| || || |||| | | | || | Sbjct 10739 ACAG-GCGCTCGAACTCCTCGCCGTAGCAGTCACTGAGACCCGGGCACGTACTTGGGTC- 10682 Query 23317 CATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 ||| || ||||| | ||| | | ||||| |||| || || || || ||||| || Sbjct 10681 CATCAGCGTCCACTTCCCCTCACTCTTCACGCGCTTCATGAACAGGTCGGGGATCCACAG 10622 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 |||||||| || ||||| || ||| || || ||||||||||| |||| || Sbjct 10621 CGCGTAGAAGAGGTCGCGCGCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAGCAGCAG 10562 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 ||| | || | ||| || ||||||||||||||||||| ||| || |||||| | ||| Sbjct 10561 GAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTTGCGCTT 10502 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 | ||||||||| || ||||| ||||||||||||||| |||| | ||||||||||| || Sbjct 10501 ACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGGCACCAG 10442 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 ||||| |||| |||| ||| || | || | || | |||||| || Sbjct 10441 GCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTTGTGCAC 10382 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 ||| | || ||||| ||| ||| || || | ||||| | ||||| |||||||| Sbjct 10381 GTGCAGGCCGATGCCGCCGGCCGCCTTGCTGATGACGGCGCACTCCTTCAGCGTGTCGTA 10322 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 ||| || || |||||||| || || | |||||| | ||| ||||| ||| |||| || Sbjct 10321 GATCCCGTCAATGCTGTCGTCCTTCGACGCGACGAGGAAGCACGAGCTCATCTGCGGCTT 10262 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAG 23796 ||||| |||| ||| || |||||| |||||||||| || | || |||||||| || Sbjct 10261 CGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAAAAAGCCCTTCGACATCAG 10202 Query 23797 ATTGTACGTGTC 23808 || |||||| || Sbjct 10201 ATCGTACGTCTC 10190 Score = 150 bits (166), Expect = 2e-31 Identities = 506/781 (65%), Gaps = 19/781 (2%) Strand=Plus/Minus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 ||||| ||||||| || || | ||||||| || ||||| || || |||| |||||| Sbjct 11895 TCCACCGTAAACTTAATCGCATCGGCGGCCGCCTTCGTGCGCAGGTAGTACACACCCGTC 11836 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 ||||||||| || ||||| ||| || | |||||||| | | || | | || Sbjct 11835 TTCAGACCCGACTCCCACGTGTAGAAGAGCATCGACGTGATCTGGCCCGAGGTGGGGCTC 11776 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | || | | | || | |||||| ||| ||||| || || || ||| |||||| Sbjct 11775 TGCAGGAAGAGGTTCAGCGACTGGGACTGGTCGATGTACTGGCCGCGGTCGCGGGCCATG 11716 Query 22289 TTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAAC 22348 | |||| | ||| || || ||||| || || |||||| | | | | || | Sbjct 11715 TCGATCAGCTTGCGCTGCGGGATCTCCCACACCGTGCGGTACAGCTCCTTCAGGTCGTCC 11656 Query 22349 GGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTA 22408 || || ||||| || | ||||| ||||| | | |||||| || ||||| Sbjct 11655 GGGATGCTGTCGATGGTCAGCACGGAGCCGTTGTAGGAGATGATCTCGTTGCGCATCGTC 11596 Query 22409 TCGTTCCACAAACCGATGGCGGTCAAA----TCTTTGACCAGATGACGGTTCACCACTTG 22464 || ||||||| ||| || | || || | || || | ||||||||| | Sbjct 11595 TCATTCCACAGGCCG----CGCTTAATGAGGTCCATCACGAGGTACTTGTTCACCACCGG 11540 Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 ||||||||| || ||||| || || ||||| || ||||| || ||||| | || Sbjct 11539 GAACTCGCCGCTCAGCACGCGACGAACATAGATGTTCGAGGTGAAAGGCTCGAAGCACTC 11480 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 ||||| || || || || | |||||| ||||| ||||||||||| | ||| || ||||| Sbjct 11479 GTTGTTGCCGAGGATTTGCGAGGTCGAGGCGGTGGGCATCGGCGCAAGCAGGAGAGAGTT 11420 Query 22585 TCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATC---GGA 22641 | || |||| || | || |||||| | ||| |||||| | | | Sbjct 11419 GCGCATGCCGACCTGCACCACCTTCTGCTTGAGGCTGTCCCAATCCCACCGGCCGCTGTT 11360 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 ||| | || | |||||| ||| | |||| | ||| |||| || |||||||| | Sbjct 11359 CGGGCGCGGGTTCTTCCACATGTCGAACTGCAGGATGCCCTGACTGGCTGGGCTGCCCTT 11300 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGC-TCGCCTCCAACGCGCCGT 22760 | |||| ||||| || || | | || || || || | || ||||| ||| || Sbjct 11299 GAACGTCTCGTAGGGGCCCTCCTCCTTCGCCAGCTC-CATCGACGACTCCACGGCGGCGA 11241 Query 22761 AATATATAGTCTCGAAGATTTTCTTGTTCAATTCG-GCGGCG--GCGACGCTTTCGTACG 22817 | || || || |||||||| | | ||||| || || ||| | ||| || | | Sbjct 11240 AGTAGATCGTTTCGAAGATCTCCGCGTTCA---CGCGCTGCGCCTCAGGGCTGGCGAAGG 11184 Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 ||| |||| || | ||| |||||||||| || || ||||| | || | ||| |||| Sbjct 11183 GCAGGCGCAGCAGGATGAAGGCGTCCGCCAGGCCTTGCACGCCCAGGCCCACCGGGCGGT 11124 Query 22878 T 22878 | Sbjct 11123 T 11123 >seq6967 Length=22635 Score = 334 bits (370), Expect = 7e-87 Identities = 554/792 (70%), Gaps = 6/792 (1%) Strand=Plus/Plus Query 23020 GGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTC 23079 |||||| ||||| || ||||| || || ||| || ||||||||||| ||||| || Sbjct 1221 GGCGATGGAGGCGAGGTTGCACACCGCGGTCTCCTCCGGCGACGTGTACTCCACAATCTC 1280 Query 23080 GGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCA 23139 ||| || || || ||||| || ||||| | || ||||||| || | ||||| Sbjct 1281 GGTGCAGAGGTTCGAGCACTTGATGGTGCCGAGGTTCTTCTGGTTCGACTTGCTGTTGCA 1340 Query 23140 CGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCG 23199 || ||||||||||| ||| |||| ||| ||||||| ||||||||||| ||||| Sbjct 1341 CGCGTCCTTGTAGAGGATGAACGGGACGCCGGTCTCGATCTGCGACTCGAGAATCGCAAA 1400 Query 23200 CCACATAGTCTGAGCGTGAACACGTC-GCACGTACCTGCCTTCTTCCTCGTACTTTTGGT 23258 ||||| ||| || || | |||| |||| | ||| || ||||||| | || Sbjct 1401 CCACACCTCCTGTGCCTGGAT-CGTCTGCACTCCGCGGCCCTCCGCCTCGTAGCGCTCGT 1459 Query 23259 ACAACGCG-TCAAATTCGGCACCGTAACAGTCGGCCAGGCC-GGGCGATTGCATCGGACA 23316 ||| ||| || || || | ||||| ||||| || || |||| | | | || | Sbjct 1460 ACAG-GCGCTCGAACTCCTCGCCGTAGCAGTCACTGAGACCCGGGCACGTACTTGGGTC- 1517 Query 23317 CATGAGACTCCACATTGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAG 23376 ||| || ||||| | ||| | | ||||| |||| || || || || ||||| || Sbjct 1518 CATCAGCGTCCACTTCCCCTCACTCTTCACGCGCTTCATGAACAGGTCGGGGATCCACAG 1577 Query 23377 AGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAA 23436 |||||||| || ||||| || ||| || || ||||||||||| |||| || Sbjct 1578 CGCGTAGAAGAGGTCGCGCGCACGCTGGTCGTCCTTGCCGGTGTTGCGCTTCAGCAGCAG 1637 Query 23437 AAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTT 23496 ||| | || | ||| || ||||||||||||||||||| ||| || |||||| | ||| Sbjct 1638 GAAGCCGAAGATGTCGGCGTGCCACGGCTCGAGGTAAATGGCGAAGGCGCCCTTGCGCTT 1697 Query 23497 ATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAG 23556 | ||||||||| || ||||| ||||||||||||||| |||| | ||||||||||| || Sbjct 1698 ACCGCCGCCCTGGTCCACGTAGCGGGCCGTGTTGTTGAACACGCGCAGCATCGGCACCAG 1757 Query 23557 ACCGTTGGACGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAAC 23616 ||||| |||| |||| ||| || | || | || | |||||| || Sbjct 1758 GCCGTTCGACGTGCCGTTCGTGCCAGCGATGTAGCTGCCGGCGGAGCGGATGTTGTGCAC 1817 Query 23617 GTGGAAACCTATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTA 23676 ||| | || ||||| ||| ||| || || | ||||| | ||||| |||||||| Sbjct 1818 GTGCAGGCCGATGCCGCCGGCCGCCTTGCTGATGACGGCGCACTCCTTCAGCGTGTCGTA 1877 Query 23677 GATGCCCTCGATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTT 23736 ||| || || |||||||| || || | |||||| | ||| ||||| ||| |||| || Sbjct 1878 GATCCCGTCAATGCTGTCGTCCTTCGACGCGACGAGGAAGCACGAGCTCATCTGCGGCTT 1937 Query 23737 GGGCGTAGCGGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAG 23796 ||||| |||| ||| || |||||| |||||||||| || | || |||||||| || Sbjct 1938 CGGCGTGCCGGCGTTGAAGAGGGTCGGGGTGGCGTGCGTGAAAAAGCCCTTCGACATCAG 1997 Query 23797 ATTGTACGTGTC 23808 || |||||| || Sbjct 1998 ATCGTACGTCTC 2009 Score = 150 bits (166), Expect = 2e-31 Identities = 506/781 (65%), Gaps = 19/781 (2%) Strand=Plus/Plus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 ||||| ||||||| || || | ||||||| || ||||| || || |||| |||||| Sbjct 304 TCCACCGTAAACTTAATCGCATCGGCGGCCGCCTTCGTGCGCAGGTAGTACACACCCGTC 363 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGCAAG 22228 ||||||||| || ||||| ||| || | |||||||| | | || | | || Sbjct 364 TTCAGACCCGACTCCCACGTGTAGAAGAGCATCGACGTGATCTGGCCCGAGGTGGGGCTC 423 Query 22229 TCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCCATA 22288 | || | | | || | |||||| ||| ||||| || || || ||| |||||| Sbjct 424 TGCAGGAAGAGGTTCAGCGACTGGGACTGGTCGATGTACTGGCCGCGGTCGCGGGCCATG 483 Query 22289 TTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCTAAC 22348 | |||| | ||| || || ||||| || || |||||| | | | | || | Sbjct 484 TCGATCAGCTTGCGCTGCGGGATCTCCCACACCGTGCGGTACAGCTCCTTCAGGTCGTCC 543 Query 22349 GGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATCGTA 22408 || || ||||| || | ||||| ||||| | | |||||| || ||||| Sbjct 544 GGGATGCTGTCGATGGTCAGCACGGAGCCGTTGTAGGAGATGATCTCGTTGCGCATCGTC 603 Query 22409 TCGTTCCACAAACCGATGGCGGTCAAA----TCTTTGACCAGATGACGGTTCACCACTTG 22464 || ||||||| ||| || | || || | || || | ||||||||| | Sbjct 604 TCATTCCACAGGCCG----CGCTTAATGAGGTCCATCACGAGGTACTTGTTCACCACCGG 659 Query 22465 AAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTC 22524 ||||||||| || ||||| || || ||||| || ||||| || ||||| | || Sbjct 660 GAACTCGCCGCTCAGCACGCGACGAACATAGATGTTCGAGGTGAAAGGCTCGAAGCACTC 719 Query 22525 ATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTT 22584 ||||| || || || || | |||||| ||||| ||||||||||| | ||| || ||||| Sbjct 720 GTTGTTGCCGAGGATTTGCGAGGTCGAGGCGGTGGGCATCGGCGCAAGCAGGAGAGAGTT 779 Query 22585 TCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATC---GGA 22641 | || |||| || | || |||||| | ||| |||||| | | | Sbjct 780 GCGCATGCCGACCTGCACCACCTTCTGCTTGAGGCTGTCCCAATCCCACCGGCCGCTGTT 839 Query 22642 CGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTC 22701 ||| | || | |||||| ||| | |||| | ||| |||| || |||||||| | Sbjct 840 CGGGCGCGGGTTCTTCCACATGTCGAACTGCAGGATGCCCTGACTGGCTGGGCTGCCCTT 899 Query 22702 GTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGC-TCGCCTCCAACGCGCCGT 22760 | |||| ||||| || || | | || || || || | || ||||| ||| || Sbjct 900 GAACGTCTCGTAGGGGCCCTCCTCCTTCGCCAGCTC-CATCGACGACTCCACGGCGGCGA 958 Query 22761 AATATATAGTCTCGAAGATTTTCTTGTTCAATTCG-GCGGCG--GCGACGCTTTCGTACG 22817 | || || || |||||||| | | ||||| || || ||| | ||| || | | Sbjct 959 AGTAGATCGTTTCGAAGATCTCCGCGTTCA---CGCGCTGCGCCTCAGGGCTGGCGAAGG 1015 Query 22818 GCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGT 22877 ||| |||| || | ||| |||||||||| || || ||||| | || | ||| |||| Sbjct 1016 GCAGGCGCAGCAGGATGAAGGCGTCCGCCAGGCCTTGCACGCCCAGGCCCACCGGGCGGT 1075 Query 22878 T 22878 | Sbjct 1076 T 1076 >seq9960 Length=1600 Score = 96.9 bits (106), Expect = 3e-15 Identities = 115/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| || || |||||| || |||| || || || Sbjct 488 CATGCAGATCTTCGTGAAGACCCTGACCGGTAAGACGATCGCCCTCGAGGTCGAGGCGAG 547 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || || || ||||||||| ||| | ||||| || || Sbjct 548 CGACACCATCGAGAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCGCCGGATCA 607 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| || || ||||||||||| ||| |||| || Sbjct 608 GCAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGA 643 >seq5028 Length=838 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| ||||| || || |||||| || |||| || || || Sbjct 616 CATGCAGATCTTCGTGAAGACGCTGACCGGTAAGACGATCGCCCTCGAGGTCGAGGCGAG 675 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||||| |||| | || || || || ||||||||| ||| | ||||| ||||| Sbjct 676 CGACACCATCGAGAACGTGAAGGCGAAGATNCAGGACAAGGAGGGCATCCCGCCGGACCA 735 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 |||||| || || || || ||||| ||| |||| || Sbjct 736 GCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGA 771 >seq5564 Length=1640 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/216 (70%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 58217 CGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGA 58276 ||| || || |||||| || |||| |||||| || ||||||| ||||||| || Sbjct 6 CGACGCGCTGCCGGTGCGGCTGATCGGCATGAACGCGGAGCTGATGTCGCAGTACATCGA 65 Query 58277 GTTTGTTGCCGACAGACTTTTGCTCGAACTGAT--TGGAGAGCGTCATTACAACACGAAA 58334 ||| ||||| ||| | || || | ||| |||||| || |||||| || Sbjct 66 GTTCGTTGCGGACCGGCTGCTGGTGTCGCTGGGGCTGGAGAAG--CACTACAACGTGACG 123 Query 58335 AATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaa 58394 | || || || || ||| | |||||||||| |||||||||| ||||| ||||| || Sbjct 124 CAGCCCTTCGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAGAAG 183 Query 58395 aaaGTTAGCGAATATCAAAAATACGGCGTGATGAGC 58430 || ||| |||| || || || |||||||||||| Sbjct 184 AAGGTTGGCGAGTACCAGAAGGCTGGCGTGATGAGC 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445710350447280