Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq7593 82.4 5e-11 seq6102 82.4 5e-11 >seq7593 Length=7721 Score = 82.4 bits (90), Expect = 5e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 33577 ATGGGCGACAAGTT-TGCATCGTTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGA 33635 || || |||||||| |||| | ||||| | ||||||||||| ||| || || | Sbjct 3386 ATCGGTGACAAGTTCTGCAGCCGGCACGGGC-AGAAGGGCACGAACGGTATTCAGTTCCG 3328 Query 33636 CCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCA 33695 ||| ||||||||| |||| ||||||||||| || ||||| ||||||||||||| Sbjct 3327 TCAGGAGGACATGCCCTTCAATCGTGACGGCGTGGTGCCCGACCTCATCATCAACCCGCA 3268 Query 33696 TGCGTTCCCCTCGCGCATGACGGT 33719 || | || || || |||||||| Sbjct 3267 CGCCATTCCTTCCCGTATGACGGT 3244 >seq6102 Length=7716 Score = 82.4 bits (90), Expect = 5e-11 Identities = 106/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 33577 ATGGGCGACAAGTT-TGCATCGTTCACGGCCCAGAAGGGCACGTGCGGCATGATGTACGA 33635 || || |||||||| |||| | ||||| | ||||||||||| ||| || || | Sbjct 4331 ATCGGTGACAAGTTCTGCAGCCGGCACGGGC-AGAAGGGCACGAACGGTATTCAGTTCCG 4389 Query 33636 CCAGTGGGACATGCCGTTCACGGCCGACGGCGTGGTCCCGGACCTAGTCATCAACCCGCA 33695 ||| ||||||||| |||| ||||||||||| || ||||| ||||||||||||| Sbjct 4390 TCAGGAGGACATGCCCTTCAATCGTGACGGCGTGGTGCCCGACCTCATCATCAACCCGCA 4449 Query 33696 TGCGTTCCCCTCGCGCATGACGGT 33719 || | || || || |||||||| Sbjct 4450 CGCCATTCCTTCCCGTATGACGGT 4473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356189927875777