Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq9960 89.7 4e-13 seq5028 89.7 4e-13 >seq9960 Length=1600 Score = 89.7 bits (98), Expect = 4e-13 Identities = 139/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || |||||||| || || | || | |||||||||||||| || || | Sbjct 680 CTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCCAGCGAA 621 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAGA 48654 || | |||||||||||| ||| | | ||||||||| || ||| ||| | Sbjct 620 GATCAGGCGCTGCTGATCCGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACGTT 561 Query 48655 CGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCAC 48714 | | ||||| ||| | | ||| ||||| | || || |||||||| || || ||||| Sbjct 560 CTCGATGGTGTCGCTCGCCTCGACCTCGAGGGCGATCGTCTTACCGGTCAGGGTCTTCAC 501 Query 48715 AAAAATCTGCATCGTGTCT 48733 || |||||||| |||||| Sbjct 500 GAAGATCTGCATGGTGTCT 482 >seq5028 Length=838 Score = 89.7 bits (98), Expect = 4e-13 Identities = 141/200 (71%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTGCTTACCGCCGT 48593 |||||| || |||||||| || || || || || | |||||||||||||| ||| | Sbjct 808 CTCCTTCTGGATGTTGTAGTCCGC-AAGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAA 750 Query 48594 AAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGATAG 48653 | || | |||||||| ||| ||| | | ||||||||| || ||| ||| | Sbjct 749 AGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGNATCTTCGCCTTCACGT 690 Query 48654 ACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCA 48713 | | ||||| ||| | | ||| ||||| | || || |||||||| || || |||| Sbjct 689 TCTCGATGGTGTCGCTCGCCTCGACCTCGAGGGCGATCGTCTTACCGGTCAGCGTCTTCA 630 Query 48714 CAAAAATCTGCATCGTGTCT 48733 | || |||||||| |||||| Sbjct 629 CGAAGATCTGCATGGTGTCT 610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421199557104059