Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5028 87.8 2e-12 >seq5028 Length=838 Score = 87.8 bits (96), Expect = 2e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24996 ACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCG 25055 || ||||| || || || ||||| |||||||||| | ||| | |||| || ||| || Sbjct 614 ACCATGCAGATCTTCGTGAAGACGCTGACCGGTAAGACGATCGCCCTCGAGGTCGAGGCG 673 Query 25056 TCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| |||||| ||||| || || ||||| || || || || || ||| Sbjct 674 AGCGACACCATCGAGAACGTGAAGGCGAAGATNCAGGACAAGGAGGGCATCCCGCCGGAC 733 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || ||||| | || ||||||||||| || | || || | ||||| | | || ||| Sbjct 734 CAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTTGCGGACTAC 793 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || ||||| || | ||||| Sbjct 794 AACATCCAGAAGGAGTCGACGCTGCACCTCGTGCT 828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433274876560085