Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq9923 87.8 2e-12 >seq9923 Length=5125 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/218 (69%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 114185 CGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACC 114244 ||| || || || || |||||||| || | || || || || || || || || Sbjct 1248 CGTCGACTCCTTCTGGATGTTGTAGTCCGCGAGCGTGCGGCCCTCCTCCAGCTGCTTGCC 1307 Query 114245 AGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTT 114304 ||| |||| || ||||| |||||||| || ||||| || ||||| |||||| || Sbjct 1308 AGCAAAGATCAGGCGCTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGAATCTTCGCCTT 1367 Query 114305 TAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGT 114364 | | || | |||||| ||| ||||| |||| | | || ||||||||||| || Sbjct 1368 CACGTTCTCGATCGTGTCGCTGGCCTCGACCTCCAGCGCAATGGTCTTGCCGGTCAGCGT 1427 Query 114365 TTTTACAAAAATCTGCATGGCTTAATTATTCCTTTCCT 114402 || || || ||||||||| |||||| ||||||| Sbjct 1428 CTTCACGAAGATCTGCATG-----ATTATTGCTTTCCT 1460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420082894017108