Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Crithidia_20mellificae_20[genbank_20GCA_5F002216565.1_202017-07-11] 10,059 sequences; 49,951,730 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq5296 100 4e-16 >seq5296 Length=18544 Score = 100 bits (110), Expect = 4e-16 Identities = 152/214 (71%), Gaps = 13/214 (6%) Strand=Plus/Plus Query 41381 CAGCTTGGCACGCTGGGTTCCGGCAACCACTTCATTGAACTGTGCGTGGAC------CAG 41434 || ||||||||||| || | |||||||||||||| || || ||| | ||| ||| Sbjct 14711 CACCTTGGCACGCTCGGCACAGGCAACCACTTCATCGAGCTCTGCCTCGACGATCAACAG 14770 Query 41435 TCGCAAG---ACGTGTGGATCATGCTGCATAGCGGTTCGCGCGGTGTGGGCAACATCATC 41491 |||| |||||||| | |||||||| ||| |||||||||||||| ||| |||| Sbjct 14771 CCGCAGCCGCACGTGTGGGTGATGCTGCACTCCGGCTCGCGCGGTGTGGGTAACCGCATC 14830 Query 41492 GG--CCGTCACTACATCGAGCGTGCGCAGAAGGAGTGCGGCATGTGGCACAGCAGCCTGC 41549 || |||| || |||||||| ||| ||||||| ||| | || || ||| | Sbjct 14831 GGCTCCGT--CTTCATCGAGCTCGCGAAGAAGGACGTCGGTGCGCAGCTGAGTCACCTAC 14888 Query 41550 CGCACAACGATCTCGCGTTCTTCCCTGAGGACAC 41583 | || ||||||||||| ||| | ||| | ||| Sbjct 14889 CCGACGCCGATCTCGCGTACTTGCGTGAAGGCAC 14922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739794968332600